RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 TEX13BQ9BXU2 312 aa6.18□□□□□ -1.42
LINC00343-202ENST00000415294 CD93Q9NPY3 652 aa6.18□□□□□ -1.42
LINC00343-202ENST00000415294 CPSF3Q9UKF6 684 aaKnown RBP6.18□□□□□ -1.42
LINC00343-202ENST00000415294 ZFP37Q9Y6Q3 630 aaPredicted RBP6.18□□□□□ -1.42
LINC00343-202ENST00000415294 NAV1Q8NEY1 1877 aa6.18□□□□□ -1.42
LINC00343-202ENST00000415294 SHROOM3Q8TF72 1996 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 IGHV4OR15-8A0A075B7B6 117 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 A0A0G2JNG1 304 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 C4orf47A7E2U8 309 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 HNRNPCL2B2RXH8 293 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 J3QKU1 62 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 HLA-DOBP13765 273 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 HOXB8P17481 243 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 ADORA1P30542 326 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 CDKN2AP42771 156 aaKnown RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 LINC00205P59089 165 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 KIR2DS5Q14953 304 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 RABL6Q3YEC7 729 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 NDUFAF5Q5TEU4 345 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 DNAJB7Q7Z6W7 309 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 ABI3BPQ7Z7G0 1075 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 DAZLQ92904 295 aaKnown RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 LYZL4Q96KX0 146 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 DUX5Q96PT3 197 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 FNBP1Q96RU3 617 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 CDCA3Q99618 268 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 RSPH9Q9H1X1 276 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 BICC1Q9H694 974 aaKnown RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 VCPKMTQ9H867 229 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 XAB2Q9HCS7 855 aaKnown RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 KCNS2Q9ULS6 477 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 SNX7Q9UNH6 387 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 PADI2Q9Y2J8 665 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 SPIN1Q9Y657 262 aaPredicted RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 POMT1Q9Y6A1 747 aa6.17□□□□□ -1.42
LINC00343-202ENST00000415294 SPTAN1Q13813 2472 aaKnown RBP6.17□□□□□ -1.42
LINC00343-202ENST00000415294 DENND4AQ7Z401 1863 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 ASB14A6NK59 587 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 MEIS2O14770 477 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 RNASEH1O60930 286 aaKnown RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 SLU7O95391 586 aaKnown RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 GCNT3O95395 438 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 TFAP2AP05549 437 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 NGFRP08138 427 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 CBLP22681 906 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 TNNT3P45378 269 aaPredicted RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 EEF1A2Q05639 463 aaKnown RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 TUBB2AQ13885 445 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 BTG3Q14201 252 aaPredicted RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 DUOXA1Q1HG43 343 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 MDH1BQ5I0G3 518 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 SFMBT2Q5VUG0 894 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 MFSD12Q6NUT3 480 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 LONP2Q86WA8 852 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 CEP57L1Q8IYX8 460 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 CPSF7Q8N684 471 aaKnown RBP6.16□□□□□ -1.42
LINC00343-202ENST00000415294 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 SCARB1Q8WTV0 552 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 CCDC107Q8WV48 283 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 NEUROG1Q92886 237 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 TUBB2BQ9BVA1 445 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 FAM129AQ9BZQ8 928 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 RAB23Q9ULC3 237 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 MYH7BA7E2Y1 1941 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 FREM2Q5SZK8 3169 aa6.16□□□□□ -1.42
LINC00343-202ENST00000415294 GREB1Q4ZG55 1949 aa6.15□□□□□ -1.42
LINC00343-202ENST00000415294 CACNA1FO60840 1977 aa6.15□□□□□ -1.42
LINC00343-202ENST00000415294 TEX15Q9BXT5 2789 aa6.15□□□□□ -1.42
LINC00343-202ENST00000415294 CTAGE9A4FU28 777 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 MPHOSPH10O00566 681 aaKnown RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 CLIC2O15247 247 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 IGHV2-70P01814 119 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 CTAGE8P0CG41 777 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SAGP10523 405 aaPredicted RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 VDRP11473 427 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 TCF7P36402 384 aaPredicted RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 LHX1P48742 406 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 DSCR9P59020 149 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 ZBTB17Q13105 803 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SLC39A14Q15043 492 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 UGCGQ16739 394 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 IRAK1BP1Q5VVH5 260 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 PLXDC2Q6UX71 529 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 UNQ6126/PRO20091Q6UXV3 157 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SPATA19Q7Z5L4 167 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 CTAGE4Q8IX94 777 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 GDAP1Q8TB36 358 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SSMEM1Q8WWF3 244 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SEPT8Q92599 483 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 DHX58Q96C10 678 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 ZNF689Q96CS4 500 aaPredicted RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 OXNAD1Q96HP4 312 aaPredicted RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 ZNF479Q96JC4 524 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 SGK494Q96LW2 274 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 MEIS3Q99687 375 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 CPNE1Q99829 537 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 LRRC1Q9BTT6 524 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 MLPHQ9BV36 600 aaPredicted RBP6.15□□□□□ -1.43
LINC00343-202ENST00000415294 CLMPQ9H6B4 373 aa6.15□□□□□ -1.43
LINC00343-202ENST00000415294 RAI14Q9P0K7 980 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms