RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NPIPB15A6NHN6 443 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 METTL15A6NJ78 407 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SUV39H1O43463 412 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 DLGAP3O95886 979 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SLC10A3P09131 477 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 GGT2P36268 569 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ASMTP46597 345 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CLK1P49759 484 aaKnown RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 ZNF45Q02386 682 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PRKCZQ05513 592 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CHIT1Q13231 466 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 USP45Q70EL2 814 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 USP43Q70EL4 1123 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 TMEM173Q86WV6 379 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 AMER2Q8N7J2 671 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 OR2AP1Q8NGE2 309 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 OR6K2Q8NGY2 324 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 WDR20Q8TBZ3 569 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 WFDC5Q8TCV5 224 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ECHDC3Q96DC8 303 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 C11orf24Q96F05 449 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 RAD9AQ99638 391 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 COPS4Q9BT78 406 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 DOHHQ9BU89 302 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 C6orf62Q9GZU0 229 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 BRF2Q9HAW0 419 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 NMRK2Q9NPI5 230 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SPATA6Q9NWH7 488 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 A0A1W2PQ67 120 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 AGRPO00253 132 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 AP3D1O14617 1153 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SNPHO15079 494 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ADAMDEC1O15204 470 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 AIREO43918 545 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 NBNO60934 754 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ZNF821O75541 412 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 CDK1P06493 297 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ATP1B2P14415 290 aaPredicted RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 SERPINB1P30740 379 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PCGF2P35227 344 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 NUDT6P53370 316 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PFN3P60673 137 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SNRPD1P62314 119 aaKnown RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 SELENOWP63302 87 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PTSQ03393 145 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PLD1Q13393 1074 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 KRR1Q13601 381 aaKnown RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 SF1Q15637 639 aaKnown RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 ATP13A5Q4VNC0 1218 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 TOR1AIP1Q5JTV8 583 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 PDE12Q6L8Q7 609 aaKnown RBP9.45□□□□□ -0.9
CD44-206ENST00000415148 GDPD3Q7L5L3 318 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 TSPAN33Q86UF1 283 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ZSWIM9Q86XI8 627 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 KLHDC8AQ8IYD2 350 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 SYTL1Q8IYJ3 562 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ADAMTS19Q8TE59 1207 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CHTF18Q8WVB6 975 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CRELD1Q96HD1 420 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 DUSP26Q9BV47 211 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CDADC1Q9BWV3 514 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 TAS2R16Q9NYV7 291 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 FZD4Q9ULV1 537 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 RNF6Q9Y252 685 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 ATP11BQ9Y2G3 1177 aa9.45□□□□□ -0.9
CD44-206ENST00000415148 CASP8AP2Q9UKL3 1982 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 MN1Q10571 1320 aaPredicted RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 C1orf226A1L170 272 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 AGAP5A6NIR3 686 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TBKBP1A7MCY6 615 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CLCA1A8K7I4 914 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 H0YIV9 168 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PRAMEF4O60810 478 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 RFPL2O75678 378 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CPSF4O95639 269 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 OLFM2O95897 454 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ANXA8P13928 327 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 RPL17P18621 184 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 HNF4AP41235 474 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CASP3P42574 277 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CTSKP43235 329 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TM4SF4P48230 202 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 SEMG2Q02383 582 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 IRF8Q02556 426 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PRKCDQ05655 676 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TP53BP2Q13625 1128 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 EIF4HQ15056 248 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 RGNQ15493 299 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.44□□□□□ -0.9
CD44-206ENST00000415148 PRAMEF9Q5VWM5 478 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 LRRC66Q68CR7 880 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 AKAP14Q86UN6 197 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 METTL4Q8N3J2 472 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CPXM2Q8N436 756 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms