RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CPNE1Q99829 537 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 FAM129AQ9BZQ8 928 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 PHACTR1Q9C0D0 580 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 LHPPQ9H008 270 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 LRRC4CQ9HCJ2 640 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SLAMF7Q9NQ25 335 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 CTNNAL1Q9UBT7 734 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 MKL2Q9ULH7 1088 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SLC22A14Q9Y267 594 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 B3GNT3Q9Y2A9 372 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 OARD1Q9Y530 152 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 A0A1W2PQ72 361 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 TRBC2A0A5B9 178 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 ESYT3A0FGR9 886 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 CTAGE15A4D2H0 777 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 MAP2K7O14733 419 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 PHGDHO43175 533 aaKnown RBP16.76■□□□□ 0.27
LSM5-204ENST00000409909 IPO13O94829 963 aaKnown RBP16.76■□□□□ 0.27
LSM5-204ENST00000409909 CDKL1Q00532 357 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 EEF1A2Q05639 463 aaKnown RBP16.76■□□□□ 0.27
LSM5-204ENST00000409909 SRSF1Q07955 248 aaKnown RBP eCLIP16.76■□□□□ 0.27
LSM5-204ENST00000409909 CSHL1Q14406 222 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 USP10Q14694 798 aaKnown RBP16.76■□□□□ 0.27
LSM5-204ENST00000409909 AGAP7PQ5VUJ5 663 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 IGFL2Q6UWQ7 119 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 NDUFAF7Q7L592 441 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 CTAGE6Q86UF2 777 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 OR51Q1Q8NH59 317 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 AGAP4Q96P64 663 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 GPR22Q99680 433 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 DERL2Q9GZP9 239 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 HCN3Q9P1Z3 774 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 CSAG2Q9Y5P2 127 aa16.76■□□□□ 0.27
LSM5-204ENST00000409909 DOPEY2Q9Y3R5 2298 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 LOC102723996A0A087X1L8 192 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 IGHV1-45A0A0A0MS14 117 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 CLEC18AA5D8T8 446 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 OR2W5A6NFC9 320 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 FAM155BO75949 473 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 CCDC166P0CW27 439 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 GP5P40197 560 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 GDF5P43026 501 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 UQCRFS1P47985 274 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 SLC12A2P55011 1212 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ILF2Q12905 390 aaKnown RBP16.75■□□□□ 0.27
LSM5-204ENST00000409909 KBTBD12Q3ZCT8 623 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 TMEM205Q6UW68 189 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 NXPE4Q6UWF7 544 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 CLEC18BQ6UXF7 455 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ADAMTSL2Q86TH1 951 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ZADH2Q8N4Q0 377 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ANKRD53Q8N9V6 530 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 CLEC18CQ8NCF0 446 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 RHBDF1Q96CC6 855 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 EGFL8Q99944 293 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 VN1R1Q9GZP7 353 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 ZDHHC18Q9NUE0 388 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 NAALAD2Q9Y3Q0 740 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 SLC22A7Q9Y694 548 aa16.75■□□□□ 0.27
LSM5-204ENST00000409909 NSG1A0A0A6YYJ2 146 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 NDUFS4O43181 175 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 DNAJB6O75190 326 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 RDH16O75452 317 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 URI1O94763 535 aaPredicted RBP16.74■□□□□ 0.27
LSM5-204ENST00000409909 KLHL18O94889 574 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 B3GALT4O96024 378 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 SLC35G6P0C7Q6 338 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 CXCR2P25025 360 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 GMPRP36959 345 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 XCR1P46094 333 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 SCTRP47872 440 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 SLC6A12P48065 614 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 HNMTP50135 292 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 REEP5Q00765 189 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
LSM5-204ENST00000409909 PWP1Q13610 501 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 PCOLCEQ15113 449 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 TGFBIQ15582 683 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 ZKSCAN8Q15776 578 aaPredicted RBP16.74■□□□□ 0.27
LSM5-204ENST00000409909 CRB2Q5IJ48 1285 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 Q6ZS92 163 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 CUZD1Q86UP6 607 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 CTAGE3PQ8IX95 158 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 KLHDC8AQ8IYD2 350 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 EFCAB3Q8N7B9 438 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 GALNT11Q8NCW6 608 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 FBF1Q8TES7 1133 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 PSMF1Q92530 271 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 TM9SF4Q92544 642 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 TSPAN17Q96FV3 270 aa16.74■□□□□ 0.27
LSM5-204ENST00000409909 ZNF700Q9H0M5 742 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms