RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TRIM38O00635 465 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ENTPD5O75356 428 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 KLHL18O94889 574 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 PRPS1L1P21108 318 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SLC6A2P23975 617 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 PTX3P26022 381 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SH3BGRP55822 239 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 NXPH1P58417 271 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ACSM2AQ08AH3 577 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 DMWDQ09019 674 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 DDX39BQ13838 428 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 DPY19L1Q2PZI1 675 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ACSM2BQ68CK6 577 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 DLEU7Q6UYE1 221 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 KRTCAP2Q8N6L1 136 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 C1orf52Q8N6N3 182 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 DNAJB8Q8NHS0 232 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SLC13A3Q8WWT9 602 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 LCN9Q8WX39 176 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SH3KBP1Q96B97 665 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 HSPA12BQ96MM6 686 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 YIPF2Q9BWQ6 316 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF717Q9BY31 904 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SPHK1Q9NYA1 384 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 APOBEC3BQ9UH17 382 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 BAIAP2L1Q9UHR4 511 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 MAPRE3Q9UPY8 281 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 KMT2EQ8IZD2 1858 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 TRBV5-3A0A0A0MS03 114 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 BTN3A3O00478 584 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ACOT8O14734 319 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 VILLO15195 856 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 MAP3K7O43318 606 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 CLEC3AO75596 197 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 FKBP9O95302 570 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 LMNAP02545 664 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 PGRP06401 933 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ME2P23368 584 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ASMTP46597 345 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ARFIP1P53367 373 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 CCNIQ14094 377 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 GPR18Q14330 331 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 KIR2DS3Q14952 304 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ZIC1Q15915 447 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SNCBQ16143 134 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 FXNQ16595 210 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 FAM174BQ3ZCQ3 159 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 PRRT3Q5FWE3 981 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SPANXN4Q5MJ08 99 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SAMD4BQ5PRF9 694 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 LRIF1Q5T3J3 769 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 C6orf163Q5TEZ5 329 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 WDR5BQ86VZ2 330 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 KIAA2013Q8IYS2 634 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 FBXL6Q8N531 539 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 TTLQ8NG68 377 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 B4GALNT2Q8NHY0 566 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 CREB3L4Q8TEY5 395 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 NUDT8Q8WV74 236 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 STARD8Q92502 1023 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 JADE3Q92613 823 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 GTF2H4Q92759 462 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 TMEM125Q96AQ2 219 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 SH3GL1Q99961 368 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 EBPLQ9BY08 206 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 RNPEPL1Q9HAU8 725 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 MRPS30Q9NP92 439 aaKnown RBP5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ANKMY1Q9P2S6 941 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 INVSQ9Y283 1065 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 ABCA7Q8IZY2 2146 aa5.29□□□□□ -1.56
EPHA4-202ENST00000409854 C15orf38-AP3S2A0A0A6YYH1 394 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 H7BY64 318 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 STK25O00506 426 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 NME4O00746 187 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 TNFSF14O43557 240 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 MYO1DO94832 1006 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 HSD17B1P14061 328 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 JUNDP17535 347 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 CMPK1P30085 196 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 AHRP35869 848 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 DGKQP52824 942 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 PHC1P78364 1004 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 DYNC1I2Q13409 638 aaKnown RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 PWP1Q13610 501 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 NFYCQ13952 458 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 UGT8Q16880 541 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ADPRMQ3LIE5 342 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF542PQ5EBM4 170 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 DEPDC1Q5TB30 811 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 C1orf146Q5VVC0 180 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 KHDRBS2Q5VWX1 349 aaKnown RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 COMMD6Q7Z4G1 85 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ARPINQ7Z6K5 226 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 DHDDSQ86SQ9 333 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 SLC9B2Q86UD5 537 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 PAQR7Q86WK9 346 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms