RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 IRF8Q02556 426 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 DOC2AQ14183 400 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 PCBP2Q15366 365 aaKnown RBP eCLIP20.17■□□□□ 0.824e-6■■■■□ 22.4
TSPAN4-206ENST00000397408 NDUFA9Q16795 377 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 PRMT9Q6P2P2 845 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 C16orf46Q6P387 395 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 KRT78Q8N1N4 520 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 ANKRD53Q8N9V6 530 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 ZCCHC10Q8TBK6 192 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 PTCD3Q96EY7 689 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 DRC3Q9H069 523 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 TNPO3Q9Y5L0 923 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 CREG1O75629 220 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 PIM1P11309 404 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 EEF1DP29692 281 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 SNRPNP63162 240 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 CDC20Q12834 499 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 CHIT1Q13231 466 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 ATP1A1-AS1Q5TC04 95 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 FAM69BQ5VUD6 431 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 TMEM214Q6NUQ4 689 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 SH2D5Q6ZV89 423 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 COX15Q7KZN9 410 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■■ 92.8
TSPAN4-206ENST00000397408 TMEM151AQ8N4L1 468 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 KCT2Q8NC54 265 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 MOCOSQ96EN8 888 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 WDR34Q96EX3 536 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 MVB12AQ96EY5 273 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 EFCAB11Q9BUY7 163 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 ROPN1BQ9BZX4 212 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 FAM117AQ9C073 453 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 ROPN1Q9HAT0 212 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 ZNF304Q9HCX3 659 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 PADI2Q9Y2J8 665 aa20.16■□□□□ 0.82
TSPAN4-206ENST00000397408 ZFYVE26Q68DK2 2539 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 A0A0A6YYC8 382 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 A8MT66 165 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 STX16-NPEPL1H3BU86 382 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 I3L1I5 382 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 STX16O14662 325 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 GLRA3O75311 464 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 CD22P20273 847 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 TMIGD1Q6UXZ0 262 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 GOLGA7Q7Z5G4 137 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 SYVN1Q86TM6 617 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 COL26A1Q96A83 441 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 FKBP10Q96AY3 582 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 DCDC2Q9UHG0 476 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 LGALS13Q9UHV8 139 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 TCFL5Q9UL49 500 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 CDC14AQ9UNH5 594 aa20.15■□□□□ 0.82
TSPAN4-206ENST00000397408 E2F3O00716 465 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 FOXS1O43638 330 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 CNOT3O75175 753 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 ONECUT2O95948 504 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 KRT4P19013 534 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 TAC1P20366 129 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 FBLP22087 321 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 PIK3CGP48736 1102 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 FOXL2P58012 376 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 RGS1Q08116 209 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 PWP1Q13610 501 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 IL10RAQ13651 578 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 GTF2H2Q13888 395 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 FAM53BQ14153 422 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 ERV3-1Q14264 604 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 TBCCQ15814 346 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 PAGE2BQ5JRK9 111 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 GTF2H2CQ6P1K8 395 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 MRPL14Q6P1L8 145 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 METTL2BQ6P1Q9 378 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 PRSS41Q7RTY9 318 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 C4orf33Q8N1A6 199 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 TRPV3Q8NET8 790 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 NT5CQ8TCD5 201 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 MMABQ96EY8 250 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 PITHD1Q9GZP4 211 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 COPG2Q9UBF2 871 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 CTSFQ9UBX1 484 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 CACNA1GO43497 2377 aa20.14■□□□□ 0.81
TSPAN4-206ENST00000397408 CDC14CA4D256 554 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 PRPF4O43172 522 aaKnown RBP eCLIP20.13■□□□□ 0.819e-7■■■■□ 19.8
TSPAN4-206ENST00000397408 IL1RNP18510 177 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 DSG2Q14126 1118 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 E2F2Q14209 437 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 CRTC2Q53ET0 693 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 OVCH1Q7RTY7 1134 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 TTLQ8NG68 377 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 OR9A4Q8NGU2 314 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 TMEM109Q9BVC6 243 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 NT5DC2Q9H857 520 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 PCTPQ9UKL6 214 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 EMCNQ9ULC0 261 aa20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 PTRH2Q9Y3E5 179 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-206ENST00000397408 NBEAQ8NFP9 2946 aa20.12■□□□□ 0.81
TSPAN4-206ENST00000397408 COPEO14579 308 aa20.12■□□□□ 0.81
TSPAN4-206ENST00000397408 ERLIN1O75477 346 aa20.12■□□□□ 0.81
TSPAN4-206ENST00000397408 KLF7O75840 302 aaPredicted RBP20.12■□□□□ 0.81
TSPAN4-206ENST00000397408 WFS1O76024 890 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms