RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TUBGCP3Q96CW5 907 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 MTERF1Q99551 399 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 RHBGQ9H310 441 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 BRF2Q9HAW0 419 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 RIC8BQ9NVN3 520 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 EPHA6Q9UF33 1036 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 MAGEB17A8MXT2 336 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 E9PBE3 544 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 NPIPB8E9PQR5 432 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 FOXE1O00358 373 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 LSM1O15116 133 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 RGS14O43566 566 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 KLHL41O60662 606 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 CKMT1AP12532 417 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 HSD3B1P14060 373 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 HOXB3P14651 431 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PVRP15151 417 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PRPH2P23942 346 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 HSD3B2P26439 372 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PIK3CBP42338 1070 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 SCTRP47872 440 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 GPLD1P80108 840 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 HMGCS1Q01581 520 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 DDX39BQ13838 428 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 NAA25Q14CX7 972 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 RBBP5Q15291 538 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PERM1Q5SV97 790 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 NKAIN2Q5VXU1 208 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 METTL21CQ5VZV1 264 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 NXNQ6DKJ4 435 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 CHSY3Q70JA7 882 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PLD3Q8IV08 490 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 GBP7Q8N8V2 638 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 ZUFSPQ96AP4 578 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 DMRT3Q9NQL9 472 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 PPT2Q9UMR5 302 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 UNC13CQ8NB66 2214 aa16.21■□□□□ 0.19
TSPAN4-205ENST00000397406 CPED1A4D0V7 1026 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 CAPN5O15484 640 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 ZW10O43264 779 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 OR1F1O43749 312 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 DUX1O43812 170 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 PEX11AO75192 247 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 DCTN3O75935 186 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 LBPP18428 481 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 CD1CP29017 333 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 GRK3P35626 688 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 BCL6P41182 706 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 GFERP55789 205 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 CFHR1Q03591 330 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 NR6A1Q15406 480 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 IMPG1Q17R60 797 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 SPDYAQ5MJ70 313 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 C6orf136Q5SQH8 315 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 TMEM198Q66K66 360 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 OGFOD2Q6N063 350 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 IRGCQ6NXR0 463 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 MTDHQ86UE4 582 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 Q8N9G6 341 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 NCSTNQ92542 709 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 NAT6Q93015 286 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 NMUR2Q9GZQ4 415 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 MYLK2Q9H1R3 596 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 SEMA6CQ9H3T2 930 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 SYNPO2LQ9H987 977 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 ADGRE2Q9UHX3 823 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 PILRAQ9UKJ1 303 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 PCDHGA1Q9Y5H4 931 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 ADAMTS20P59510 1910 aa16.2■□□□□ 0.18
TSPAN4-205ENST00000397406 MN1Q10571 1320 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CASC3O15234 703 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 PRAMEF10O60809 474 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ETHE1O95571 254 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TBX6O95947 436 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SERPINA6P08185 405 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ALDOCP09972 364 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 EZRP15311 586 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ST6GAL1P15907 406 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CDH3P22223 829 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SERPINB1P30740 379 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CSF2RBP32927 897 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 RPS13P62277 151 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 RELAQ04206 551 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ZIC1Q15915 447 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 INAVAQ3KP66 663 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ATP6AP1LQ52LC2 224 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 FBXO42Q6P3S6 717 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 C6orf89Q6UWU4 347 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 MFSD9Q8NBP5 474 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 AHCYL2Q96HN2 611 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 PPP3R2Q96LZ3 170 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TRAPPC9Q96Q05 1148 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 MAP3K3Q99759 626 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 KLHL25Q9H0H3 589 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ZNF385DQ9H6B1 395 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 C1GALT1Q9NS00 363 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 PKD1L2Q7Z442 2459 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms