RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 KRT87PA6NCN2 255 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 GABRR3A8MPY1 467 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 H0YIG0 161 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 TFECO14948 347 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 METTL18O95568 372 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 EZRP15311 586 aaKnown RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 BDKRB1P46663 353 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 SEMA3AQ14563 771 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 MAPKAPK3Q16644 382 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 NDUFA9Q16795 377 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 P3H1Q32P28 736 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 FLYWCH1Q4VC44 716 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 CCDC38Q502W7 563 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 FASTKD1Q53R41 847 aaKnown RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 RNFT1Q5M7Z0 435 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 TSTD2Q5T7W7 516 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 ZNF425Q6IV72 752 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 C11orf63Q6NUN7 778 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 ZNF534Q76KX8 674 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 PCGF5Q86SE9 256 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 KRT222Q8N1A0 295 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 SLC5A8Q8N695 610 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 PEX13Q92968 403 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 RERGQ96A58 199 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 FOPNLQ96NB1 174 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 PANX3Q96QZ0 392 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 SECISBP2Q96T21 854 aaKnown RBP8.85□□□□□ -0.99
NEDD9-203ENST00000397378 FAM118BQ9BPY3 351 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 ACAT2Q9BWD1 397 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 ABHD10Q9NUJ1 306 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 SLC2A6Q9UGQ3 507 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 CBLCQ9ULV8 474 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 PCDHA3Q9Y5H8 950 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 TLN2Q9Y4G6 2542 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 P2RX6O15547 441 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 NME2P1O60361 137 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 MAN1A2O60476 641 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 PRMT3O60678 531 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 SLC25A12O75746 678 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 TJP3O95049 919 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 MATN4O95460 622 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 NSA2O95478 260 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 TPM3P06753 285 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 CD53P19397 219 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 NME2P22392 152 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 UQCRC1P31930 480 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 AVPR1BP47901 424 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 ZFP36L2P47974 494 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 TTPAP49638 278 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 PRAMEP78395 509 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 MAT1AQ00266 395 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 PRDX1Q06830 199 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 CDH17Q12864 832 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 PTK6Q13882 451 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 ARHGAP19Q14CB8 494 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 PTRHD1Q6GMV3 140 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 OTOAQ7RTW8 1153 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 WDR53Q7Z5U6 358 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 ANKRD37Q7Z713 158 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 POGLUT1Q8NBL1 392 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 OR52K1Q8NGK4 314 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 OR6P1Q8NGX9 317 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 SMPDL3AQ92484 453 aa8.84□□□□□ -0.99
NEDD9-203ENST00000397378 TRIM45Q9H8W5 580 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 RUVBL2Q9Y230 463 aaKnown RBP8.84□□□□□ -0.99
NEDD9-203ENST00000397378 TRIM64A6NGJ6 449 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 TRIM64BA6NI03 449 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ERI2A8K979 691 aaKnown RBP8.83□□□□□ -1
NEDD9-203ENST00000397378 GOLGA6L19H0YKK7 550 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 CCNDBP1O95273 360 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 GAS8O95995 478 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ADRA1DP25100 572 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ATP5DP30049 168 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 RPA3P35244 121 aaPredicted RBP8.83□□□□□ -1
NEDD9-203ENST00000397378 PEX19P40855 299 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 TAS2R50P59544 299 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 GBX1Q14549 363 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 MINDY4Q4G0A6 757 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ANKRD20A4Q4UJ75 823 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 MFSD4BQ5TF39 518 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ICE2Q659A1 982 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 PAPD4Q6PIY7 484 aaKnown RBP8.83□□□□□ -1
NEDD9-203ENST00000397378 SUSD1Q6UWL2 747 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 LRRC6Q86X45 466 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 FAM71DQ8N9W8 422 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 OR9A1PQ8NGU1 263 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 OR51Q1Q8NH59 317 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 FAM222BQ8WU58 562 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 SKA2Q8WVK7 121 aaPredicted RBP8.83□□□□□ -1
NEDD9-203ENST00000397378 ZNF778Q96MU6 729 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 LPAR4Q99677 370 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 SARGQ9BW04 601 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 P2RY12Q9H244 342 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 PCYOX1Q9UHG3 505 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms