RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 R3HCC1LQ7Z5L2 792 aaKnown RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 FAM129CQ86XR2 697 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 ZZZ3Q8IYH5 903 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 EID3Q8N140 333 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 METTL4Q8N3J2 472 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 RAB42Q8N4Z0 105 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 C2orf73Q8N5S3 287 aaPredicted RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 OR14C36Q8NHC7 312 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 WDR48Q8TAF3 677 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 CYGBQ8WWM9 190 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 SMPDL3AQ92484 453 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 RMND5BQ96G75 393 aaPredicted RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 SPATA9Q9BWV2 254 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 MKRN2Q9H000 416 aaKnown RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 OR51B5Q9H339 312 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 RMI1Q9H9A7 625 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 ATAD3AQ9NVI7 634 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 VPS4AQ9UN37 437 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 SAMD4AQ9UPU9 718 aaKnown RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 MYRFQ9Y2G1 1151 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 NUMA1Q14980 2115 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 DOCK9Q9BZ29 2069 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 RNASET2O00584 256 aaKnown RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 YY2O15391 372 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 H6PDO95479 791 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 HPRP00739 348 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 CST1P01037 141 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 PABPC4LP0CB38 370 aaKnown RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 CTHP32929 405 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 IGFALSP35858 605 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 CAPGP40121 348 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 RPL5P46777 297 aaKnown RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 ADPRHP54922 357 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 DLX2Q07687 328 aaPredicted RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 HTR4Q13639 388 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 DAG1Q14118 895 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 VMACQ2NL98 169 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 ZCCHC8Q6NZY4 707 aaKnown RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 DUS1LQ6P1R4 473 aaKnown RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 EP400NLQ6ZTU2 488 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 CHST15Q7LFX5 561 aaPredicted RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 DHRSXQ8N5I4 330 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 ZNF740Q8NDX6 193 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 AIF1LQ9BQI0 150 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 ACAT2Q9BWD1 397 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 OSGEPL1Q9H4B0 414 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 WASH6PQ9NQA3 447 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 SH3BP4Q9P0V3 963 aa14.36□□□□□ -0.11
CBX3-202ENST00000396386 ZNF282Q9UDV7 671 aaPredicted RBP14.36□□□□□ -0.11
CBX3-202ENST00000396386 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 H3BNH8 94 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 SAP18O00422 153 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 HOXB2P14652 356 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 EFNA1P20827 205 aaPredicted RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 CXCR2P25025 360 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PTX3P26022 381 aaPredicted RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 RPL10P27635 214 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 ALDH3A2P51648 485 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ARSFP54793 590 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PDE7AQ13946 482 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 RBBP5Q15291 538 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 ADRM1Q16186 407 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 LRRC23Q53EV4 343 aaPredicted RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 VN1R5Q7Z5H4 357 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PGBD3Q8N328 593 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ZCCHC7Q8N3Z6 543 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 SVOPLQ8N434 492 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.35□□□□□ -0.119e-18■■■■□ 21.8
CBX3-202ENST00000396386 C16orf78Q8WTQ4 265 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PYURFQ96I23 114 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 C12orf66Q96MD2 445 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 MENTQ9BUN1 341 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 SLC17A9Q9BYT1 436 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 EPB41L1Q9H4G0 881 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 TPT1P8Q9HAU6 139 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 AASDHPPTQ9NRN7 309 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 LMCD1Q9NZU5 365 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 NDUFA13Q9P0J0 144 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 EXO1Q9UQ84 846 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 C1orf226A1L170 272 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 GNGT2O14610 69 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 KLF8O95600 359 aaPredicted RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 FURINP09958 794 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ATP6V1B1P15313 513 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 NELFEP18615 380 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 SERPINB1P30740 379 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 CCR8P51685 355 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 REEP5Q00765 189 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ZNF385BQ569K4 471 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 OTUD3Q5T2D3 398 aaPredicted RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 TBPL2Q6SJ96 375 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 IKBIPQ70UQ0 350 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 HORMAD1Q86X24 394 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ZDHHC13Q8IUH4 622 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ADHFE1Q8IWW8 467 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 IL17RCQ8NAC3 791 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms