RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CBLBQ13191 982 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 NR1I3Q14994 352 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 ZNF585AQ6P3V2 769 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 PODNL1Q6PEZ8 512 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 PAOXQ6QHF9 649 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 PRSS41Q7RTY9 318 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 YTHDF3Q7Z739 585 aaKnown RBP12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 KLHDC8BQ8IXV7 354 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 LKAAEAR1Q8TD35 194 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 LANCL2Q9NS86 450 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 IFNKQ9P0W0 207 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 RSPH14Q9UHP6 348 aa12.76□□□□□ -0.37
VCPKMT-201ENST00000395859 A0A087X0T9 212 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 OR1I1O60431 355 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 VPS26AO75436 327 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 TPM1P09493 284 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 OR56A5P0C7T3 313 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 FAM228BP0C875 321 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 ERGP11308 486 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 FOXN2P32314 431 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 HSPA14Q0VDF9 509 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 NAA25Q14CX7 972 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 CATSPEREQ5SY80 951 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 C1orf185Q5T7R7 199 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 KIAA0408Q6ZU52 694 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 TRILQ7L0X0 811 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 RFX6Q8HWS3 928 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 NAXEQ8NCW5 288 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 CFAP61Q8NHU2 1237 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 TSLPQ969D9 159 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 RAD51AP1Q96B01 352 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 MAK16Q9BXY0 300 aaKnown RBP12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 VPS9D1Q9Y2B5 631 aa12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.37
VCPKMT-201ENST00000395859 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 MAGEB17A8MXT2 336 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 ESPNB1AK53 854 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 CLDN4O14493 209 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 AQP7O14520 342 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 TXNDC9O14530 226 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 ANXA9O76027 345 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 C1orf105O95561 183 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 BCL6P41182 706 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 AVPR1BP47901 424 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 PPIAP62937 165 aaKnown RBP12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 MFSD7Q6UXD7 560 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 BZW1Q7L1Q6 419 aaKnown RBP12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 NFAM1Q8NET5 270 aaPredicted RBP12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 ASZ1Q8WWH4 475 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 ATG10Q9H0Y0 220 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 SCN3AQ9NY46 2000 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 TGP01266 2768 aa12.74□□□□□ -0.37
VCPKMT-201ENST00000395859 SMPD2O60906 423 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 EZRP15311 586 aaKnown RBP12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 BMP7P18075 431 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 AOAHP28039 575 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CMPK1P30085 196 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CDKN2BP42772 138 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 SORDQ00796 357 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 NSDHLQ15738 373 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 MFSD4BQ5TF39 518 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 VN1R4Q7Z5H5 301 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 PDSS2Q86YH6 399 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CYP4Z2PQ8N1L4 340 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 PPP1R14CQ8TAE6 165 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CNPPD1Q9BV87 410 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 CARD6Q9BX69 1037 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 TTTY12Q9BZ98 90 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 HCN3Q9P1Z3 774 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 NFS1Q9Y697 457 aa12.73□□□□□ -0.37
VCPKMT-201ENST00000395859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.374e-7■■■■■ 43.8
VCPKMT-201ENST00000395859 A0A0G2JMM0 328 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 A0A1W2PPB8 328 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 A0A1W2PRS3 328 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 MBD3L4A6NDZ8 208 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 OR51F1A6NGY5 319 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 MBD3L5A6NJ08 208 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 KIR3DP1A8MWS1 328 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 ZNF500O60304 480 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 BDKRB1P46663 353 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 ACTN3Q08043 901 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 HSPB2Q16082 182 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms