RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 ITGB1BP2Q9UKP3 347 aa16.01■□□□□ 0.15
C11orf49-204ENST00000395460 VPS4AQ9UN37 437 aa16.01■□□□□ 0.15
C11orf49-204ENST00000395460 BTBD3Q9Y2F9 522 aa16.01■□□□□ 0.15
C11orf49-204ENST00000395460 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
C11orf49-204ENST00000395460 CARNS1A5YM72 827 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TMEM247A6NEH6 219 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 GABRR3A8MPY1 467 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 ARHGEF33A8MVX0 844 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 EFCAB9A8MZ26 197 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TMEM229AB2RXF0 380 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 ANXA8P13928 327 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 IDSP22304 550 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 GABRR2P28476 465 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 SELENOWP63302 87 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 RAE1P78406 368 aaKnown RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 AHSA2Q719I0 299 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 GALNT10Q86SR1 603 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 DNASE1L2Q92874 299 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 ZNF558Q96NG5 402 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 RHNO1Q9BSD3 238 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 COPS4Q9BT78 406 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 BHLHE41Q9C0J9 482 aaPredicted RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 DSN1Q9H410 356 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 FAM83DQ9H4H8 585 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 PCDH12Q9NPG4 1184 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 RNF6Q9Y252 685 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 LYVE1Q9Y5Y7 322 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 OBSL1O75147 1896 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 E7EQ34 232 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TAF4O00268 1085 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 ANXA4P09525 319 aaPredicted RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 HLA-FP30511 346 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 LSM3P62310 102 aaKnown RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 FBXO43Q4G163 708 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 PERM1Q5SV97 790 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 GAREM2Q75VX8 874 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 RNF175Q8N4F7 328 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TRAM1L1Q8N609 369 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 OR56A3Q8NH54 315 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TPD52L3Q96J77 140 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 MTERF1Q99551 399 aaKnown RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 RAD9AQ99638 391 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 RASSF1Q9NS23 344 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 STOX2Q9P2F5 926 aaPredicted RBP16■□□□□ 0.15
C11orf49-204ENST00000395460 ATP6V1HQ9UI12 483 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 WDR37Q9Y2I8 494 aa16■□□□□ 0.15
C11orf49-204ENST00000395460 TRAV19A0A0A6YYK7 116 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 SAGE2PA6NJ88 616 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 CATP04040 527 aaKnown RBP15.99■□□□□ 0.15
C11orf49-204ENST00000395460 INHAP05111 366 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 LCKP06239 509 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 RRM2P31350 389 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 VIPR1P32241 457 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 CYP4F8P98187 520 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 CDC20Q12834 499 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.99■□□□□ 0.15
C11orf49-204ENST00000395460 GDPD4Q6W3E5 623 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 DENND6BQ8NEG7 585 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 BBS2Q9BXC9 721 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 ALOXE3Q9BYJ1 711 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 RUBCNLQ9H714 662 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 SGK2Q9HBY8 427 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.99■□□□□ 0.15
C11orf49-204ENST00000395460 THSD1Q9NS62 852 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 POFUT2Q9Y2G5 429 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 UGT2A1Q9Y4X1 527 aa15.99■□□□□ 0.15
C11orf49-204ENST00000395460 CLCA1A8K7I4 914 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 TNFRSF11BO00300 401 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 GCM2O75603 506 aaPredicted RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 RFPL2O75678 378 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 CDK1P06493 297 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 NUDT7P0C024 238 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 ALDH4A1P30038 563 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 TIA1P31483 386 aaKnown RBP eCLIP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 EIF2DP41214 584 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 FCHO2Q0JRZ9 810 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 ZNF404Q494X3 552 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 TSEN54Q7Z6J9 526 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 DDX53Q86TM3 631 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 DEPDC4Q8N2C3 294 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 DNAJC22Q8N4W6 341 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 C1orf52Q8N6N3 182 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 MCFD2Q8NI22 146 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 REPS1Q96D71 796 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 MYOCQ99972 504 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 ZSCAN5AQ9BUG6 496 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 DCSTAMPQ9H295 470 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 SP140LQ9H930 580 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 INIPQ9NRY2 104 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 NDUFAF4Q9P032 175 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 MGAT4DA6NG13 374 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 ITGA2P17301 1181 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 RPL3P39023 403 aaKnown RBP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 PPIGQ13427 754 aaKnown RBP eCLIP15.98■□□□□ 0.15
C11orf49-204ENST00000395460 GAB1Q13480 694 aa15.98■□□□□ 0.15
C11orf49-204ENST00000395460 EIF4HQ15056 248 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms