RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 DNAJC14Q6Y2X3 702 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 GPR180Q86V85 440 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ANKRD46Q86W74 232 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 IFNEQ86WN2 208 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 RIMKLAQ8IXN7 391 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ADGRF3Q8IZF5 1079 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 METTL4Q8N3J2 472 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 FBXL6Q8N531 539 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 OR7A2PQ8NGA2 310 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 LMX1AQ8TE12 382 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SLC37A2Q8TED4 501 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 JADE3Q92613 823 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SLC22A18Q96BI1 424 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 F2RL3Q96RI0 385 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 LRRC61Q9BV99 259 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 PCDHAC1Q9H158 963 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 RMND5AQ9H871 391 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NANOGQ9H9S0 305 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SLC6A20Q9NP91 592 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 PPT2Q9UMR5 302 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SNX7Q9UNH6 387 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PLXND1Q9Y4D7 1925 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 TRBC2A0A5B9 178 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NME4O00746 187 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 HAT1O14929 419 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ZW10O43264 779 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 MAP3K7O43318 606 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PRMT3O60678 531 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SNRNP200O75643 2136 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 CSF2P04141 144 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SERPINB1P30740 379 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIR3DL1P43629 444 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 CSNK1EP49674 416 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 C21orf59P57076 290 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 AP2B1P63010 937 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PHC1P78364 1004 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SRSF11Q05519 484 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 TRIM25Q14258 630 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 KHDRBS2Q5VWX1 349 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 OR4F3Q6IEY1 312 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ANKRD26P1Q6NSI1 321 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 DLEU7Q6UYE1 221 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SLC9B2Q86UD5 537 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 IQCHQ86VS3 1027 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ZNF761Q86XN6 746 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIAA2013Q8IYS2 634 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NAGSQ8N159 534 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 BHLHE22Q8NFJ8 381 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 PYDC1Q8WXC3 89 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 STARD8Q92502 1023 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 GTF2H4Q92759 462 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 TMEM125Q96AQ2 219 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 TESCQ96BS2 214 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 C11orf24Q96F05 449 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 ITCHQ96J02 903 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PRPF18Q99633 342 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 CGREF1Q99674 301 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 MS4A8Q9BY19 250 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PIF1Q9H611 641 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 POT1Q9NUX5 634 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 GMPR2Q9P2T1 348 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 SUCOQ9UBS9 1254 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 CD300AQ9UGN4 299 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PCDHA9Q9Y5H5 950 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 EML5Q05BV3 1969 aa8.27□□□□□ -1.08
TDP1-203ENST00000393454 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 C15orf38-AP3S2A0A0A6YYH1 394 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ARHGAP10A1A4S6 786 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 SCAMP2O15127 329 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 DFNA5O60443 496 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 FKBP6O75344 327 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 BCAS2O75934 225 aaPredicted RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 ANP32DO95626 131 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 HRH2P25021 359 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 SOX11P35716 441 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 BCL6P41182 706 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 FNTBP49356 437 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
TDP1-203ENST00000393454 TAS2R50P59544 299 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 LIPEQ05469 1076 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 CYP4F3Q08477 520 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 ZNF763Q0D2J5 394 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 C2orf80Q0P641 193 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 BIRC2Q13490 618 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 KIR2DS3Q14952 304 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 UGT8Q16880 541 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 DPY19L1Q2PZI1 675 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
TDP1-203ENST00000393454 CCNYL2Q5T2Q4 361 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms