RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 EIF3LQ9Y262 564 aaKnown RBP3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 WBP11Q9Y2W2 641 aaKnown RBP3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 ASB1Q9Y576 335 aa3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 PCDHGA4Q9Y5G9 962 aa3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 USH1CQ9Y6N9 552 aa3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 U3KQA8 63 aa3.39□□□□□ -1.87
ATP2B1-203ENST00000393164 COL5A1P20908 1838 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PTPRZ1P23471 2315 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 EP300Q09472 2414 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 IGHV5-10-1A0A0J9YXX1 117 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 A0A1W2PQM1 296 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 A8MU76 341 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 NDUFAB1O14561 156 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 GDF9O60383 454 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CCDC22O60826 627 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SHOX2O60902 331 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SKAP2O75563 359 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 OR2B3O76000 313 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 FAM107AO95990 144 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 MT-CO3P00414 261 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 EIF2S1P05198 315 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 JMJD7P0C870 316 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PIM1P11309 404 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 MYF5P13349 255 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ST6GAL1P15907 406 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 LBPP18428 481 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 EPORP19235 508 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 RPL3P39023 403 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 AVPR1BP47901 424 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SEPHS1P49903 392 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 AQP5P55064 265 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ITGA1P56199 1179 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CYP4F3Q08477 520 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TUBB3Q13509 450 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 IL11RAQ14626 422 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ZXDCQ2QGD7 858 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 METTL21CQ5VZV1 264 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CLEC6AQ6EIG7 209 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 RPS27LQ71UM5 84 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TRIM46Q7Z4K8 759 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ARHGAP22Q7Z5H3 698 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TRIM73Q86UV7 250 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TMPRSS12Q86WS5 348 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 NUDT13Q86X67 352 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SPNS2Q8IVW8 549 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 LSMEM2Q8N112 164 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 DCBLD1Q8N8Z6 715 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ADAMTS18Q8TE60 1221 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 USP7Q93009 1102 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 GAL3ST3Q96A11 431 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CCDC74BQ96LY2 380 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ZNF317Q96PQ6 595 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 KCNC2Q96PR1 638 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SORT1Q99523 831 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 MTERF1Q99551 399 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 C17orf62Q9BQA9 187 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TBCDQ9BTW9 1192 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CCDC28BQ9BUN5 200 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 NUF2Q9BZD4 464 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 REXO4Q9GZR2 422 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 WDR41Q9HAD4 459 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ANKHQ9HCJ1 492 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 NPHS2Q9NP85 383 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SLCO1B3Q9NPD5 702 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TCF7L2Q9NQB0 619 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 DMRT3Q9NQL9 472 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TXLNGQ9NUQ3 528 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 C1orf109Q9NX04 203 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ATXN7L1Q9ULK2 861 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TIMM22Q9Y584 194 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 DNAJC15Q9Y5T4 150 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 A0A0C4DFX4 3053 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ANKRD12Q6UB98 2062 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CCDC187A0A096LP49 1063 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 IGHV5-51A0A0C4DH38 117 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 GNG14A0A1W2PPG7 69 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 FEZF1A0PJY2 475 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SYNDIG1LA6NDD5 238 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 B4E171 279 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 H0YGG7 62 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 UBFD1O14562 309 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 HAT1O14929 419 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PIP5K1BO14986 540 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 POLR1CO15160 346 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SEC22BO75396 215 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 DCTN3O75935 186 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PDYNP01213 254 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CD63P08962 238 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 FTH1P19P0C7X4 201 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PRPS2P11908 318 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 PVRP15151 417 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ACPPP15309 386 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TLX1P31314 330 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 CSF2RBP32927 897 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 BCL6P41182 706 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 TSPAN7P41732 249 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 SSR2P43308 183 aa3.38□□□□□ -1.87
ATP2B1-203ENST00000393164 ASMTP46597 345 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms