RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 STMN2Q93045 179 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 NKD2Q969F2 451 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF446Q9NWS9 450 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ERRFI1Q9UJM3 462 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 MRPS2Q9Y399 296 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 ROCK1Q13464 1354 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 TNIKQ9UKE5 1360 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C1orf232A0A0U1RR37 186 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 TTC26A0AVF1 554 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 H7C1Q1 480 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 J3QR06 171 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 M0QZ24 198 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 DNALI1O14645 258 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 CLPXO76031 633 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FTH1P02794 183 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ICAM1P05362 532 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ADH4P08319 380 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF44P15621 663 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CD22P20273 847 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 RAB7AP51149 207 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SELENOVP59797 346 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 YWHAEP62258 255 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRR20EP86478 221 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRR20CP86479 221 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRR20DP86480 221 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRR20BP86481 221 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRR20AP86496 221 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 KLF10Q13118 480 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SSPNQ14714 243 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PON2Q15165 354 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CPSF6Q16630 551 aaKnown RBP eCLIP3.41□□□□□ -1.86
XRN1-202ENST00000392981 TCHHL1Q5QJ38 904 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 TMEM200BQ69YZ2 307 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FUT10Q6P4F1 479 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SEZ6L2Q6UXD5 910 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GALNT16Q8N428 558 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FBXL13Q8NEE6 735 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 OR13C3Q8NGS6 347 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 LRRC15Q8TF66 581 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 UBTD2Q8WUN7 234 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C11orf24Q96F05 449 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 FAM46AQ96IP4 442 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 C12orf66Q96MD2 445 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FAM83CQ9BQN1 747 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C7orf50Q9BRJ6 194 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GLIS2Q9BZE0 524 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 HINT3Q9NQE9 182 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 PLA2G2DQ9UNK4 145 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CLIC4Q9Y696 253 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SF3B1O75533 1304 aaKnown RBP eCLIP3.41□□□□□ -1.862e-6■■■■■ 83.7
XRN1-202ENST00000392981 GOLGA8QA0A0J9YX86 632 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 I6L893 689 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 CXCL11O14625 94 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PDE5AO76074 875 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 KDM4BO94953 1096 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MOCS2O96007 188 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 C9P02748 559 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 GOT1P17174 413 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 TPSB2P20231 275 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PDX1P52945 283 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 FKBP1BP68106 108 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PHEXP78562 749 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 BST1Q10588 318 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 TPSAB1Q15661 275 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 GRTP1Q5TC63 336 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 C15orf39Q6ZRI6 1047 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 FAM124AQ86V42 546 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MB21D2Q8IYB1 491 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 MLKLQ8NB16 471 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 OR10H4Q8NGA5 316 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CD300LFQ8TDQ1 290 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ASB5Q8WWX0 329 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 TFAP2BQ92481 460 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 NDRG1Q92597 394 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 RHBDF1Q96CC6 855 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 LRR1Q96L50 414 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MMS19Q96T76 1030 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 CMKLR1Q99788 373 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PELOQ9BRX2 385 aaKnown RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 TMEM43Q9BTV4 400 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MAGT1Q9H0U3 335 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 MED20Q9H944 212 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ELOVL3Q9HB03 270 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PSMC3IPQ9P2W1 217 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 DBF4Q9UBU7 674 aaPredicted RBP3.4□□□□□ -1.86
XRN1-202ENST00000392981 USH1CQ9Y6N9 552 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 ATRNL1Q5VV63 1379 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 NUP160Q12769 1436 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PRAMEF33A0A0G2JMD5 474 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 C4orf47A7E2U8 309 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 A8MUA0 341 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 SLC28A1O00337 649 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 GNB5O14775 395 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 PRAMEF10O60809 474 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 RPS6KA4O75676 772 aa3.4□□□□□ -1.86
XRN1-202ENST00000392981 SCGNO76038 276 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms