RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RLN2P04090 185 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 SLC35E2BP0CK96 405 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 ZNF30P17039 623 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 HTR1EP28566 365 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 RBM34P42696 430 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 BDKRB1P46663 353 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 LRRC66Q68CR7 880 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 SHQ1Q6PI26 577 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 TAS1R3Q7RTX0 852 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 ZNF598Q86UK7 904 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 WDTC1Q8N5D0 677 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 METTL21EPA6NDL7 271 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 APOC1P02654 83 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 VIPR1P32241 457 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 CEBPGP53567 150 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 RPS13P62277 151 aaKnown RBP12.72□□□□□ -0.37
LCA5-202ENST00000392959 SLC3A1Q07837 685 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 LRRTM4Q86VH4 590 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 TIGARQ9NQ88 270 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 DLGAP4Q9Y2H0 992 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 I3L521 148 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PIRO00625 290 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 DLGAP1O14490 977 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 SLITRK5O94991 958 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GBAP04062 536 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PROZP22891 400 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 ZNF45Q02386 682 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 RASGEF1BQ0VAM2 473 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GRB7Q14451 532 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GPRC6AQ5T6X5 926 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 ATG9BQ674R7 924 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 REEP3Q6NUK4 255 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 DCAF4L2Q8NA75 395 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 FBXO15Q8NCQ5 510 aaPredicted RBP12.72□□□□□ -0.37
LCA5-202ENST00000392959 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
LCA5-202ENST00000392959 OR5T3Q8NGG3 340 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GRHL3Q8TE85 626 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 IRF2BPLQ9H1B7 796 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 KCNH6Q9H252 994 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 MLXQ9UH92 298 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PSMD9O00233 223 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 CHP2O43745 196 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 C6orf47O95873 294 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 EDNRAP25101 427 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 NDUFS1P28331 727 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 GPR17Q13304 367 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PON3Q15166 354 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 PEX13Q92968 403 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 NSUN5Q96P11 429 aaKnown RBP12.72□□□□□ -0.37
LCA5-202ENST00000392959 SLC38A3Q99624 504 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 ADAMTS10Q9H324 1103 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
LCA5-202ENST00000392959 ISPDA4D126 451 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 TMEM150CB9EJG8 249 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 FAM72CH0Y354 149 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 RASAL1O95294 804 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
LCA5-202ENST00000392959 ST3GAL4Q11206 333 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 ARFRP1Q13795 201 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
LCA5-202ENST00000392959 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 FAM72AQ5TYM5 149 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 FAM72DQ6L9T8 149 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 ZNF627Q7L945 461 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 FAM72BQ86X60 149 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 SLC22A15Q8IZD6 547 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 OR4K1Q8NGD4 311 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 PRR11Q96HE9 360 aaPredicted RBP12.71□□□□□ -0.37
LCA5-202ENST00000392959 CD180Q99467 661 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 CARS2Q9HA77 564 aaKnown RBP12.71□□□□□ -0.37
LCA5-202ENST00000392959 SLC28A3Q9HAS3 691 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 IL36AQ9UHA7 158 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 PCDHGA3Q9Y5H0 932 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 C2orf92A0A1B0GVN3 265 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 J3QLW9 94 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 CSF2P04141 144 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 ZNF19P17023 458 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 ZNF763Q0D2J5 394 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 CCL14Q16627 93 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 SPAG16Q8N0X2 631 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 B3GNT4Q9C0J1 378 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 MEMO1Q9Y316 297 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 FER1L4A9Z1Z3 1794 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 GABBR2O75899 941 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 CD1DP15813 335 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 F8A1P23610 371 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 BMP8BP34820 402 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 MAGEA2P43356 314 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 ASRGL1Q7L266 308 aa12.71□□□□□ -0.37
LCA5-202ENST00000392959 BMP8AQ7Z5Y6 402 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms