RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NEK1Q96PY6 1258 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CDRT15Q96T59 188 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CDCA3Q99618 268 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF184Q99676 751 aaPredicted RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ARPC5LQ9BPX5 153 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PI4K2AQ9BTU6 479 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MAK16Q9BXY0 300 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 AGXT2Q9BYV1 514 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PRRG4Q9BZD6 226 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PLA2G12AQ9BZM1 189 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 FTOQ9C0B1 505 aaKnown RBP eCLIP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 HRH4Q9H3N8 390 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 IKZF5Q9H5V7 419 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SP140LQ9H930 580 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ISG20L2Q9H9L3 353 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 KCNK13Q9HB14 408 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 C3orf14Q9HBI5 128 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RAVER2Q9HCJ3 691 aaKnown RBP0.31□□□□□ -2.36
SNORD28-201ENST00000384706 DEPPQ9NTK1 212 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 TBC1D13Q9NVG8 400 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 DPP3Q9NY33 737 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 STK26Q9P289 416 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 SLC13A4Q9UKG4 626 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PILRAQ9UKJ1 303 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RAB26Q9ULW5 256 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MGAT4AQ9UM21 535 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PLAGL1Q9UM63 463 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MOKQ9UQ07 419 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF148Q9UQR1 794 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 WDR83OSQ9Y284 106 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 PADI2Q9Y2J8 665 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NME7Q9Y5B8 376 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 CPQQ9Y646 472 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 RUSC2Q8N2Y8 1516 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 NEDD4P46934 1319 aa0.31□□□□□ -2.36
SNORD28-201ENST00000384706 MEGF6O75095 1541 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGKV2-28A0A075B6P5 120 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGKV2D-24A0A075B6R9 120 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 A0A087WZ39 114 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 FEZF1A0PJY2 475 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 LNP1A1A4G5 178 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MTMR11A4FU01 709 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 FRG2CA6NGY1 282 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 EPOPA6NHQ4 379 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 A6NLC8 198 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZFP92A6NM28 416 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 C17orf51A8MQB3 221 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 A8MVM7 634 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 A8MZ25 164 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TRIM49D1C9J1S8 452 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CCL24O00175 119 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RNF103O00237 685 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 O00370 1275 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF861PO60384 105 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MITFO75030 526 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TSC22D2O75157 780 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 OR6B1O95007 311 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 OR2C1O95371 312 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 BAG3O95817 575 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 LDHAP00338 332 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGKV1-17P01599 117 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGKV2D-28P01615 120 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGLV1-47P01700 117 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CD5P06127 495 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF44P15621 663 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CDH2P19022 906 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 C4BPBP20851 252 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 HNRNPA2B1P22626 353 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MPZP25189 248 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 FCGR2BP31994 310 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 FCGR2CP31995 323 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ACSL1P33121 698 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MATR3P43243 847 aaKnown RBP eCLIP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CCT5P48643 541 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 FNTAP49354 379 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PPM1FP49593 454 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PPOXP50336 477 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SLC25A1P53007 311 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MFAP4P55083 255 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PSG7Q13046 419 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SRSF9Q13242 221 aaKnown RBP eCLIP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 BIRC3Q13489 604 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CRYMQ14894 314 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 NONOQ15233 471 aaKnown RBP eCLIP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TAZQ16635 292 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TSTQ16762 297 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ECSCRQ19T08 205 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 POM121L1PQ3SYA9 428 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IGSF11Q5DX21 431 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZRANB3Q5FWF4 1079 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ARMCX4Q5H9R4 360 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MUC21Q5SSG8 566 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 AGBL2Q5U5Z8 902 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 AGAP6Q5VW22 663 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 DHRS7BQ6IAN0 325 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MFSD12Q6NUT3 480 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ARMCX5Q6P1M9 558 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TMEM154Q6P9G4 183 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RFWD3Q6PCD5 774 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TEX38Q6PEX7 206 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms