RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ARHGAP15Q53QZ3 475 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 TCEAL5Q5H9L2 206 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 GALNT18Q6P9A2 607 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 SLCO4C1Q6ZQN7 724 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 CCDC71Q8IV32 467 aaPredicted RBP19.31■□□□□ 0.68
EBF1-202ENST00000380654 SYTL1Q8IYJ3 562 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 PARP8Q8N3A8 854 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 SLC15A4Q8N697 577 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 ATG16L2Q8NAA4 619 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 ZFP90Q8TF47 636 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 ZNF566Q969W8 418 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 LRRC3BQ96PB8 259 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 THUMPD1Q9NXG2 353 aaKnown RBP19.31■□□□□ 0.68
EBF1-202ENST00000380654 NFKBIL1Q9UBC1 381 aaPredicted RBP19.31■□□□□ 0.68
EBF1-202ENST00000380654 RAPGEFL1Q9UHV5 662 aa19.31■□□□□ 0.68
EBF1-202ENST00000380654 TMEM229AB2RXF0 380 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 H3BM21 787 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 QSOX1O00391 747 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 PCDH7O60245 1069 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 GCM2O75603 506 aaPredicted RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 C1orf105O95561 183 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 PCSK2P16519 638 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 MEF2AQ02078 507 aaPredicted RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 MOGQ16653 247 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 IER5LQ5T953 404 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 ANGPTL8Q6UXH0 198 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 C12orf40Q86WS4 652 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 CFAP206Q8IYR0 622 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 BORCS5Q969J3 196 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 PLEKHA8Q96JA3 519 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 C7orf34Q96L11 122 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 RASSF1Q9NS23 344 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 KRT84Q9NSB2 600 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 KIF17Q9P2E2 1029 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 ENPP5Q9UJA9 477 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 CARNS1A5YM72 827 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 ZNF99A8MXY4 864 aaPredicted RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 PLK4O00444 970 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 SPINT1O43278 529 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 NDUFS2O75306 463 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 SOD1P00441 154 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 HSD3B1P14060 373 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 TNFRSF1BP20333 461 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 HSD3B2P26439 372 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 TIA1P31483 386 aaKnown RBP eCLIP19.3■□□□□ 0.68
EBF1-202ENST00000380654 ITGA1P56199 1179 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 C21orf59P57076 290 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 KCNJ10P78508 379 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 MC1RQ01726 317 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 NPTX1Q15818 432 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 CTF1Q16619 201 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 COX20Q5RI15 118 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 PIWIL3Q7Z3Z3 882 aaKnown RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 OR4A15Q8NGL6 344 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 FOPNLQ96NB1 174 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 ASPSCR1Q9BZE9 553 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 RAD21L1Q9H4I0 556 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 REEP1Q9H902 201 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 GPATCH2Q9NW75 528 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 TBC1D14Q9P2M4 693 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
EBF1-202ENST00000380654 ZNF451Q9Y4E5 1061 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 KCNE2Q9Y6J6 123 aa19.3■□□□□ 0.68
EBF1-202ENST00000380654 M0QX08 132 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 JRKO75564 520 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 OPN1SWP03999 348 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 ASMTP46597 345 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 SLC35A2P78381 396 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 VEZF1Q14119 521 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 KEAP1Q14145 624 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 STARD3Q14849 445 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 SETD9Q8NE22 299 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 ERLEC1Q96DZ1 483 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 CRISPLD2Q9H0B8 497 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 TBC1D23Q9NUY8 699 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 BTNL2Q9UIR0 455 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 NDRG4Q9ULP0 352 aaKnown RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 PCDHGA10Q9Y5H3 936 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 CHD9Q3L8U1 2897 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 CLPXO76031 633 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 TGFB1P01137 390 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 NPPBP16860 134 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 ZNF8P17098 575 aaPredicted RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 DDX6P26196 483 aaKnown RBP eCLIP19.29■□□□□ 0.68
EBF1-202ENST00000380654 HPCAL1P37235 193 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 GSSP48637 474 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 HBA1P69905 142 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 ZNF658BQ4V348 819 aaPredicted RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 SPIN4Q56A73 249 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 MED27Q6P2C8 311 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 CCDC81Q6ZN84 652 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 Q6ZNX1 250 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 GRASPQ7Z6J2 395 aaPredicted RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 TSEN54Q7Z6J9 526 aaKnown RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 KLHDC8AQ8IYD2 350 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 CPA6Q8N4T0 437 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 MRPL43Q8N983 215 aaKnown RBP19.29■□□□□ 0.68
EBF1-202ENST00000380654 GIPC3Q8TF64 312 aa19.29■□□□□ 0.68
EBF1-202ENST00000380654 COQ8BQ96D53 544 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms