RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PCDHGA6Q9Y5G7 932 aa10.54□□□□□ -0.72
BEST1-201ENST00000378043 MTCL1Q9Y4B5 1905 aaKnown RBP10.54□□□□□ -0.72
BEST1-201ENST00000378043 RGS10O43665 173 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 FAM20BO75063 409 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LEFTY1O75610 366 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 AP2A2O94973 939 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LCKP06239 509 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 PORP16435 677 aaPredicted RBP10.53□□□□□ -0.72
BEST1-201ENST00000378043 PDHA2P29803 388 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 VIPR1P32241 457 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 TGFBR2P37173 567 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 HNF4AP41235 474 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 BDKRB1P46663 353 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 PCDH1Q08174 1060 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ZNF846Q147U1 533 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 OXA1LQ15070 435 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ZNF385BQ569K4 471 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 TMEM236Q5W0B7 351 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 CNKSR3Q6P9H4 555 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ZNF852Q6ZMS4 543 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 PRSS48Q7RTY5 328 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 GPR156Q8NFN8 814 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 SORCS1Q8WY21 1168 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 DNASE1L2Q92874 299 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 HRASLS5Q96KN8 279 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 CORO1BQ9BR76 489 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ASPSCR1Q9BZE9 553 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 MTG2Q9H4K7 406 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 BRF2Q9HAW0 419 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 HCFC1R1Q9NWW0 138 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 KIF17Q9P2E2 1029 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ZNF451Q9Y4E5 1061 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LTBP2Q14767 1821 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LRRK1Q38SD2 2015 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NINQ8N4C6 2090 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NADKO95544 446 aaPredicted RBP10.53□□□□□ -0.72
BEST1-201ENST00000378043 CTSLP07711 333 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 ABCB1P08183 1280 aaPredicted RBP10.53□□□□□ -0.72
BEST1-201ENST00000378043 TIMP2P16035 220 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 RRM2P31350 389 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 HPCAL1P37235 193 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 CASP9P55211 416 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 OCA2Q04671 838 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 TLE2Q04725 743 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 COX20Q5RI15 118 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NIPAL1Q6NVV3 410 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LINC00299Q6ZSB3 139 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NPAS3Q8IXF0 933 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 OR56A3Q8NH54 315 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 GLMNQ92990 594 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NEIL2Q969S2 332 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 METTL2AQ96IZ6 378 aaKnown RBP10.53□□□□□ -0.72
BEST1-201ENST00000378043 CAPNS2Q96L46 248 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 PKP4Q99569 1192 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 EPYCQ99645 322 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 GABARAPL3Q9BY60 117 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 MROQ9BYG7 248 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 LINC00597Q9H2U6 94 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 NDUFAF4Q9P032 175 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 PADI2Q9Y2J8 665 aa10.53□□□□□ -0.72
BEST1-201ENST00000378043 SLC5A10A0PJK1 596 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 OR2A25A4D2G3 310 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 PRAMEF25A6NGN4 478 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 M0R3G1 203 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 SUV39H1O43463 412 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 VIPP01282 170 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 LRG1P02750 347 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 C8AP07357 584 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 BMP4P12644 408 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 HSD3B1P14060 373 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 TNFRSF1BP20333 461 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 HSD3B2P26439 372 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 ST13P50502 369 aaKnown RBP10.52□□□□□ -0.72
BEST1-201ENST00000378043 MVKQ03426 396 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 FPGSQ05932 587 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 E2F2Q14209 437 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 ARSIQ5FYB1 569 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 GPR153Q6NV75 609 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 OTOP2Q7RTS6 562 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 RAVER1Q8IY67 606 aaKnown RBP10.52□□□□□ -0.72
BEST1-201ENST00000378043 KLHDC8AQ8IYD2 350 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 TRAM1L1Q8N609 369 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 LMNTD1Q8N9Z9 388 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 OR4K1Q8NGD4 311 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.52□□□□□ -0.72
BEST1-201ENST00000378043 BTN2A2Q8WVV5 523 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 DEFB118Q96PH6 123 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 DOHHQ9BU89 302 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.72
BEST1-201ENST00000378043 FBXO8Q9NRD0 319 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 RAPGEFL1Q9UHV5 662 aa10.52□□□□□ -0.72
BEST1-201ENST00000378043 SH2B3Q9UQQ2 575 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms