RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SEC14L4Q9UDX3 406 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ASB3Q9Y575 518 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 GABBR2O75899 941 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CSF2P04141 144 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RB1P06400 928 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 IQCF3P0C7M6 154 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 PORP16435 677 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ARFIP1P53367 373 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 TXNL4AP83876 142 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 GRB14Q14449 540 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 NDUFA9Q16795 377 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 C10orf62Q5T681 223 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ARL9Q6T311 187 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 OR14C36Q8NHC7 312 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RNASE11Q8TAA1 199 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CCM2Q9BSQ5 444 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 TRMT61BQ9BVS5 477 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 C20orf27Q9GZN8 174 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 MS4A12Q9NXJ0 267 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RHCGQ9UBD6 479 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 EIF3KQ9UBQ5 218 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 AASSQ9UDR5 926 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 BAIAP2Q9UQB8 552 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ERVW-1Q9UQF0 538 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 GON4LQ3T8J9 2241 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 MAGEB3O15480 346 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 IFI30P13284 250 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CDH11P55287 796 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 NPRL3Q12980 569 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 PON2Q15165 354 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CTC1Q2NKJ3 1217 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 REEP3Q6NUK4 255 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 POMZP3Q6PJE2 187 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RGMAQ96B86 450 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF597Q96LX8 424 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 SLC35C2Q9NQQ7 365 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CARD8Q9Y2G2 431 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF451Q9Y4E5 1061 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CCDC88AQ3V6T2 1871 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CH25HO95992 272 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 BDKRB1P46663 353 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CLK3P49761 638 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PITPNAQ00169 270 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CD47Q08722 323 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CLCA4Q14CN2 919 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FAM129CQ86XR2 697 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TSEN15Q8WW01 171 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TMEM80Q96HE8 168 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ERMAPQ96PL5 475 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 GSTO2Q9H4Y5 243 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 DLGAP1O14490 977 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PEPDP12955 493 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF30P17039 623 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PTPN2P17706 415 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 EIPR1Q53HC9 387 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 SLC30A6Q6NXT4 461 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TTLQ8NG68 377 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 OR6K6Q8NGW6 343 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 MGLLQ99685 303 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 HERC2P3Q9BVR0 1158 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TCF7L1Q9HCS4 588 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 IGSF5Q9NSI5 407 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 B4GALT6Q9UBX8 382 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TIAM2Q8IVF5 1701 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 LRRC72A6NJI9 287 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 POP7O75817 140 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FGF4P08620 206 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 GRIA2P42262 883 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 HTR6P50406 440 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PGM2L1Q6PCE3 622 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 RNF130Q86XS8 419 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 SLC15A4Q8N697 577 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 OR10H5Q8NGA6 315 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 GPR151Q8TDV0 419 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ING5Q8WYH8 240 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FAM129BQ96TA1 746 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CHIAQ9BZP6 476 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 MIR1-1HGQ9H1L0 117 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 UCKL1Q9NWZ5 548 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 DUS2Q9NX74 493 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 HSPB11Q9Y547 144 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 A0A1W2PRG6 482 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FAM170BA6NMN3 283 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TLL1O43897 1013 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 SERPINA3P01011 423 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms