RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 M0R296 226 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 CNMDO75829 334 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 TM7SF2O76062 418 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 OR2C1O95371 312 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 CFIP05156 583 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ERCC1P07992 297 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 TGFBR2P37173 567 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ID1P41134 155 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 RPL35P42766 123 aaKnown RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 PRCPP42785 496 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 GMPSP49915 693 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 SOX4Q06945 474 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 KLRC3Q07444 240 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 PRMT9Q6P2P2 845 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 GPRIN1Q7Z2K8 1008 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 CDK20Q8IZL9 346 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 OR9K2Q8NGE7 335 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ACOT11Q8WXI4 607 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 RAB1CQ92928 201 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 MRGPRFQ96AM1 343 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 DNAJC19Q96DA6 116 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ELMOD3Q96FG2 381 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 CPEB1Q9BZB8 566 aaKnown RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 NXF3Q9H4D5 531 aaKnown RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 EXD2Q9NVH0 621 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 GLOD5A6NK44 160 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 FGBP02675 491 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 AKR1A1P14550 325 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 S100A7P31151 101 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PUDPQ08623 228 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 ZNF273Q14593 569 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 C2CD6Q53TS8 623 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PGAP1Q75T13 922 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 FAM219AQ8IW50 185 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 NFKBIDQ8NI38 313 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 ZFRQ96KR1 1074 aaKnown RBP8.71□□□□□ -1.02
UBR4-201ENST00000375218 SYT17Q9BSW7 474 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 DERL2Q9GZP9 239 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PCDHAC1Q9H158 963 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PRDM9Q9NQV7 894 aa8.71□□□□□ -1.02
UBR4-201ENST00000375218 PLSCR5A0PG75 271 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 E5RI56 91 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 EDN1P05305 212 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 IFNGR1P15260 489 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PRKCHP24723 683 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 RIN1Q13671 783 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TAF1AQ15573 450 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 LTB4RQ15722 352 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 DESI1Q6ICB0 168 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 MRNIPQ6NTE8 343 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 VSTM1Q6UX27 236 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 BBS12Q6ZW61 710 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 DPPA4Q7L190 304 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 GPR180Q86V85 440 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PLEKHA8Q96JA3 519 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 DEFB129Q9H1M3 183 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 MID2Q9UJV3 735 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 A6NL46 340 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 MEIS1O00470 390 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 SHMT2P34897 504 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 HTR7P34969 479 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 GJC1P36383 396 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CNTN2Q02246 1040 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TRAF2Q12933 501 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 STX3Q13277 289 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 HLXQ14774 488 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 CHI3L2Q15782 390 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TMEM26Q6ZUK4 368 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PPP1R3BQ86XI6 285 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TC2NQ8N9U0 490 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 STXBP6Q8NFX7 210 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 OR13C3Q8NGS6 347 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 NRG4Q8WWG1 115 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 GAL3ST3Q96A11 431 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 HACL1Q9UJ83 578 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 INSL6Q9Y581 213 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TEX13CA0A0J9YWL9 993 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 POTEMA6NI47 508 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 LRRC53A6NM62 1247 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 EPHB6O15197 1021 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 DDNO94850 711 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 FGGP02679 453 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 SP100P23497 879 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 DTYMKP23919 212 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CDKAL1Q5VV42 579 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 SYVN1Q86TM6 617 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms