RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ACTR5Q9H9F9 607 aaPredicted RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 AKIRIN1Q9H9L7 192 aaPredicted RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 ZBTB26Q9HCK0 441 aa17.68■□□□□ 0.42
CDX4-201ENST00000373514 SEMA4BQ9NPR2 832 aaPredicted RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 RUVBL1Q9Y265 456 aaKnown RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 MRPS2Q9Y399 296 aaKnown RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 TNPO3Q9Y5L0 923 aaKnown RBP17.68■□□□□ 0.42
CDX4-201ENST00000373514 AHCTF1Q8WYP5 2266 aa17.68■□□□□ 0.42
CDX4-201ENST00000373514 A0A1B0GTL3 188 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 TRBC2A0A5B9 178 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 STMND1H3BQB6 276 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 TAF4O00268 1085 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 OR7A17O14581 309 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 RAD1O60671 282 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CPNE3O75131 537 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 SNNO75324 88 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 H2AFYO75367 372 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 GRK3P35626 688 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 PRKAA2P54646 552 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 SRSF6Q13247 344 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 ZNF678Q5SXM1 525 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 C1orf189Q5VU69 101 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDX4-201ENST00000373514 METTL27Q8N6F8 245 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 CSNK1A1LQ8N752 337 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 MFSD9Q8NBP5 474 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 OR52B6Q8NGF0 335 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 OR6Y1Q8NGX8 325 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 SNIP1Q8TAD8 396 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 ZNF483Q8TF39 744 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 RERGQ96A58 199 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 CLIP3Q96DZ5 547 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 PTCD3Q96EY7 689 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 C10orf90Q96M02 699 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CDK15Q96Q40 435 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 AIF1LQ9BQI0 150 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 IPPKQ9H8X2 491 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 WDR70Q9NW82 654 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 RAXQ9Y2V3 346 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 PCDHB3Q9Y5E6 796 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 PPP6CO00743 305 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 LIPCP11150 499 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 GRK2P25098 689 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CD82P27701 267 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 SCTRP47872 440 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CDH13P55290 713 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 HERVK_113P63132 956 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 IRF8Q02556 426 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 RELAQ04206 551 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 ASPHQ12797 758 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 RBBP5Q15291 538 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 PRTGQ2VWP7 1150 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 UNC50Q53HI1 259 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 TCTE1Q5JU00 501 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 LCN10Q6JVE6 187 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 TLDC1Q6P9B6 456 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 TTC29Q8NA56 475 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 CCDC126Q96EE4 140 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CNTNAP3BQ96NU0 1288 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 GATA5Q9BWX5 397 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 ERVK-6Q9BXR3 956 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 CNTNAP3Q9BZ76 1288 aa17.67■□□□□ 0.42
CDX4-201ENST00000373514 NOL11Q9H8H0 719 aaKnown RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 ZNF395Q9H8N7 513 aaPredicted RBP17.67■□□□□ 0.42
CDX4-201ENST00000373514 CELSR3Q9NYQ7 3312 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 ITM2AO43736 263 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 SRPX2O60687 465 aaPredicted RBP17.66■□□□□ 0.42
CDX4-201ENST00000373514 KATNA1O75449 491 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 CCR10P46092 362 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 SLC1A6P48664 564 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 DNAJB13P59910 316 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 OCRLQ01968 901 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 TRAF3Q13114 568 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 CLN3Q13286 438 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 RBBP7Q16576 425 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 CGB2Q6NT52 195 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 FAM199XQ6PEV8 388 aaPredicted RBP17.66■□□□□ 0.42
CDX4-201ENST00000373514 TTLL10Q6ZVT0 673 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 ASPGQ86U10 573 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 PROSER1Q86XN7 944 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 DTX1Q86Y01 620 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 MYLK4Q86YV6 388 aaPredicted RBP17.66■□□□□ 0.42
CDX4-201ENST00000373514 SLC22A9Q8IVM8 553 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 L3HYPDHQ96EM0 354 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 WDR34Q96EX3 536 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 ELAC2Q9BQ52 826 aaKnown RBP17.66■□□□□ 0.42
CDX4-201ENST00000373514 SARGQ9BW04 601 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 C1QTNF3Q9BXJ4 246 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 SLC7A5P2Q9GIP4 190 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 C20orf27Q9GZN8 174 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 EHD1Q9H4M9 534 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 CUTCQ9NTM9 273 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 THAP1Q9NVV9 213 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 ACACAQ13085 2346 aa17.66■□□□□ 0.42
CDX4-201ENST00000373514 NUP210LQ5VU65 1888 aa17.65■□□□□ 0.42
CDX4-201ENST00000373514 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
CDX4-201ENST00000373514 FITM1A5D6W6 292 aa17.65■□□□□ 0.42
CDX4-201ENST00000373514 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms