RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ZCCHC10Q8TBK6 192 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 TMEM175Q9BSA9 504 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 A0A1W2PRQ8 180 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 PRAMEF11O60813 436 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 IFNA2P01563 188 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 IL7RP16871 459 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 GSTM3P21266 225 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 S100PP25815 95 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RGS19P49795 217 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 MCCD1P59942 119 aaPredicted RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 MEP1AQ16819 746 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RABL3Q5HYI8 236 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 WDTC1Q8N5D0 677 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 C1orf52Q8N6N3 182 aaKnown RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 WFIKKN2Q8TEU8 576 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 HSH2DQ96JZ2 352 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 CD244Q9BZW8 370 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 FAM120CQ9NX05 1096 aaKnown RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 WNT9AO14904 365 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ACVR2AP27037 513 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 WASP42768 502 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 CTBP2P56545 445 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SP140Q13342 867 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 C1orf220Q5T0J3 134 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 AMIGO1Q86WK6 493 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 COX18Q8N8Q8 333 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 MSANTD3Q96H12 275 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 XYLT2Q9H1B5 865 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SLC22A14Q9Y267 594 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SPARCP09486 303 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 HK1P19367 917 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 CPN2P22792 545 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 CRB2Q5IJ48 1285 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 POMZP3Q6PJE2 187 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 AMZ2Q86W34 360 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 NFKBIDQ8NI38 313 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 CD300LFQ8TDQ1 290 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ITM2CQ9NQX7 267 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ALDOAP04075 364 aaKnown RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 TFPIP10646 304 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 VIPR1P32241 457 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SERINC3Q13530 473 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SYT16Q17RD7 645 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 GDF6Q6KF10 455 aaPredicted RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF627Q7L945 461 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 MARCH9Q86YJ5 346 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 TSPEARQ8WU66 669 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 KLHL6Q8WZ60 621 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 KAT2AQ92830 837 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ABCD2Q9UBJ2 740 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 SLITRK5O94991 958 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 TGFB1P01137 390 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 PET100P0DJ07 73 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 MPIP34949 423 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RORAP35398 523 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 TSTQ16762 297 aaKnown RBP13.79□□□□□ -0.2
LMX1B-202ENST00000373474 PPP1R3AQ16821 1122 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RGMAQ96B86 450 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 OR51V1Q9H2C8 321 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 ADAMTS6Q9UKP5 1117 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 RNF11Q9Y3C5 154 aa13.79□□□□□ -0.2
LMX1B-202ENST00000373474 TRBV23OR9-2A0A075B6M9 112 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 TRBC2A0A5B9 178 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
LMX1B-202ENST00000373474 DISC1C4P0D8 188 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 H0YAE9 185 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 IL7P13232 177 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 ARSIQ5FYB1 569 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF366Q8N895 744 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 TOR1AIP2Q8NFQ8 470 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 SLC2A13Q96QE2 648 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 TSNAXQ99598 290 aaKnown RBP13.78□□□□□ -0.2
LMX1B-202ENST00000373474 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 MMP27Q9H306 513 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 TAS2R3Q9NYW6 316 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 PCDHGB2Q9Y5G2 931 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-202ENST00000373474 LRRC72A6NJI9 287 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 RASAL1O95294 804 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 H1F0P07305 194 aaKnown RBP13.78□□□□□ -0.2
LMX1B-202ENST00000373474 RYKP34925 604 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 AVPR1BP47901 424 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 NIPAL4Q0D2K0 466 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 TLR1Q15399 786 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 PRAMEF14Q5SWL7 426 aa13.78□□□□□ -0.2
LMX1B-202ENST00000373474 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms