RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PRAMEF33A0A0G2JMD5 474 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 TCRBV3S1A0A5B6 114 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MGAT4DA6NG13 374 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 PRR19A6NJB7 356 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 A8MT66 165 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 STMND1H3BQB6 276 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF701M0R085 212 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MRASO14807 208 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 TOX3O15405 576 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 PRAMEF10O60809 474 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 POP7O75817 140 aaKnown RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 UBXN7O94888 489 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MLYCDO95822 493 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ANKRD34CP0C6C1 535 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 BMP2P12643 396 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 HSD17B1P14061 328 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 LBPP18428 481 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ETV5P41161 510 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SLC19A1P41440 591 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 GLRBP48167 497 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF140P52738 457 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 HERVK_113P63132 956 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 DLG1Q12959 904 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 CEACAM7Q14002 265 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 TGIF1Q15583 401 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 LRRC36Q1X8D7 754 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 BCL7AQ4VC05 210 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SNAP47Q5SQN1 464 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MANEAQ5SRI9 462 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF678Q5SXM1 525 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 DCAF12Q5T6F0 453 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 PPP4R4Q6NUP7 873 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 UGT3A1Q6NUS8 523 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SNX20Q7Z614 316 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 C11orf96Q7Z7L8 435 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 FAM129CQ86XR2 697 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 CROCCP3Q8IVE0 287 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 CEP97Q8IW35 865 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MIER2Q8N344 545 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 TRIML2Q8N7C3 387 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZSCAN1Q8NBB4 408 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 TNIP2Q8NFZ5 429 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 OR6P1Q8NGX9 317 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SLC45A3Q96JT2 553 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF597Q96LX8 424 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 COPS8Q99627 209 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZPBPQ9BS86 351 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 C9orf16Q9BUW7 83 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ERVK-6Q9BXR3 956 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SHCBP1LQ9BZQ2 653 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 COPS7BQ9H9Q2 264 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 PNPLA3Q9NST1 481 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 SLC39A1Q9NY26 324 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF624Q9P2J8 865 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 CD300AQ9UGN4 299 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 ACSL5Q9ULC5 683 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MYRFQ9Y2G1 1151 aa10.02□□□□□ -0.81
COL5A1-202ENST00000371820 MN1Q10571 1320 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-202ENST00000371820 UNC13CQ8NB66 2214 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 OR2AG2A6NM03 316 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 EFCAB7A8K855 629 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 AGAP14A8MT82 685 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 STX16-NPEPL1H3BU86 382 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 H7C0S8 307 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 AGRPO00253 132 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 QSOX1O00391 747 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 GAPDHSO14556 408 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 STX16O14662 325 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 ANGPT2O15123 496 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 LDB2O43679 373 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 SUPT7LO94864 414 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 S1PR4O95977 384 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 GPIP06744 558 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 GSTM1P09488 218 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 SLC35G4P0C7Q5 338 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 IDO1P14902 403 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 RPL10P27635 214 aaKnown RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 NDUFS1P28331 727 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 PBLDP30039 288 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 MC4RP32245 332 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 CTSCP53634 463 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 MRPS22P82650 360 aaKnown RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 MPP1Q00013 466 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 GSTM4Q03013 218 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 SRSF6Q13247 344 aaKnown RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 INTS11Q5TA45 600 aaKnown RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 ANKS6Q68DC2 871 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 REP15Q6BDI9 236 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 KRT80Q6KB66 452 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 CEACAM20Q6UY09 585 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 RNF111Q6ZNA4 994 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 ATG14Q6ZNE5 492 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 LARP4Q71RC2 724 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 ARHGAP22Q7Z5H3 698 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 DENND6AQ8IWF6 608 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 NXPE1Q8N323 547 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms