RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HNRNPCL4P0DMR1 293 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MATN1P21941 496 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SLC3A1Q07837 685 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SNX29P2Q8IUI4 249 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 RGL4Q8IZJ4 473 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 GALNT6Q8NCL4 622 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 EFHD2Q96C19 240 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SLC2A13Q96QE2 648 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 TMEM181Q9P2C4 612 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 WNT9AO14904 365 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 C6orf47O95873 294 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 STSP08842 583 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ARCN1P48444 511 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CLDN10P78369 228 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SCRN3Q0VDG4 424 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 VMACQ2NL98 169 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 LIPKQ5VXJ0 399 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 BTN2A1Q7KYR7 527 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CDADC1Q9BWV3 514 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MTX2O75431 263 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 RB1P06400 928 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 LCN1P31025 176 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MAP2K3P46734 347 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF81P51508 661 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ADAM8P78325 824 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SERINC3Q13530 473 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 C10orf62Q5T681 223 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 PIWIL3Q7Z3Z3 882 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SPAG16Q8N0X2 631 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MGLLQ99685 303 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 LGR4Q9BXB1 951 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 PCBD2Q9H0N5 130 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CCSER2Q9H7U1 834 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CRTAC1Q9NQ79 661 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MRPS33Q9Y291 106 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 OR2AT4A6NND4 320 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 OR1I1O60431 355 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PRAMEF11O60813 436 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CLDN7O95471 211 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 HK1P19367 917 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CAPN3P20807 821 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 FAM110CQ1W6H9 321 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CYP27C1Q4G0S4 372 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF782Q6ZMW2 699 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 FAM129CQ86XR2 697 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 IMP4Q96G21 291 aaKnown RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 GAL3ST1Q99999 423 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 BCL7BQ9BQE9 202 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 EMCNQ9ULC0 261 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 MGAT4BQ9UQ53 548 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 MAB21L2Q9Y586 359 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PCDHGB1Q9Y5G3 927 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CACNB4O00305 520 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 OR2B3O76000 313 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 SLC5A2P31639 672 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CLK3P49761 638 aaKnown RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 RBBP4Q09028 425 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PON2Q15165 354 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 LRRC66Q68CR7 880 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 POMZP3Q6PJE2 187 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 SLC36A4Q6YBV0 504 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 C14orf80Q86SX3 495 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 RNF130Q86XS8 419 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 OR10H5Q8NGA6 315 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 AHCYL2Q96HN2 611 aaKnown RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 HAPLN2Q9GZV7 340 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 RC3H2Q9HBD1 1191 aaKnown RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF451Q9Y4E5 1061 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CLCA3PQ9Y6N3 262 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PRODHO43272 600 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PCCBP05166 539 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 OR4D1Q15615 310 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 NUDT13Q86X67 352 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CRYGNQ8WXF5 182 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CREB3L1Q96BA8 519 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 L3HYPDHQ96EM0 354 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CCDC32Q9BV29 185 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PCDHGB7Q9Y5F8 929 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 A0A0G2JN53 185 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PIRO00625 290 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 CMPK1P30085 196 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 DGKGP49619 791 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 NDUFA9Q16795 377 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 C7orf57Q8NEG2 295 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 OR6K6Q8NGW6 343 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 PHPT1Q9NRX4 125 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 MARCH4Q9P2E8 410 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-202ENST00000369733 SCML2Q9UQR0 700 aa15.43■□□□□ 0.06
COL17A1-202ENST00000369733 HTR2BP41595 481 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PPP3R1P63098 170 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 CD47Q08722 323 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ABRAXAS2Q15018 415 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 NATD1Q8N6N6 113 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 MSANTD3Q96H12 275 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 NDC1Q9BTX1 674 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 IGSF5Q9NSI5 407 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 EXOSC1Q9Y3B2 195 aaKnown RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 M0R233 179 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms