RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PNMA8CA0A1B0GUJ8 204 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 A0A1W2PQU0 124 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ARNTLO00327 626 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ERI3O43414 337 aaKnown RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 RNGTTO60942 597 aaKnown RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CCNB2O95067 398 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 KLF8O95600 359 aaPredicted RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ANGPTL1O95841 491 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 PEX11BO96011 259 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ARSAP15289 507 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CAPN3P20807 821 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 PRLHRP49683 370 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ALDH3A2P51648 485 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CDK6Q00534 326 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 FADDQ13158 208 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ATP6AP1Q15904 470 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 EGFLAMQ63HQ2 1017 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 SUSD1Q6UWL2 747 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CCDC80Q76M96 950 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ABHD13Q7L211 337 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ERI1Q8IV48 349 aaKnown RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 GPR135Q8IZ08 494 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM145Q8NBT3 493 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 TEX47Q8TBZ9 253 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 UBTD2Q8WUN7 234 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC38A4Q969I6 547 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 MAELQ96JY0 434 aaKnown RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 WDR92Q96MX6 357 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CAMK1GQ96NX5 476 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 BIRC8Q96P09 236 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 CXorf21Q9HAI6 301 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 HMG20AQ9NP66 347 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 P2RX2Q9UBL9 471 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 MRTO4Q9UKD2 239 aaKnown RBP5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 ERGIC3Q9Y282 383 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 DLGAP4Q9Y2H0 992 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 GPR45Q9Y5Y3 372 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 DGKBQ9Y6T7 804 aa5.14□□□□□ -1.59
SMNDC1-202ENST00000369603 TRIP11Q15643 1979 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 OR5K4A6NMS3 321 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FAM47E-STBD1D6RA91 191 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 hCG_2039718K7EN88 272 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 E2F3O00716 465 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 HOXC11O43248 304 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 DFNA5O60443 496 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZBTB11O95625 1053 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC16A8O95907 504 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 C1SP09871 688 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 BMP7P18075 431 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 EFNA1P20827 205 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FPR1P21462 350 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GGT5P36269 586 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CTSKP43235 329 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CDH15P55291 814 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FOXA1P55317 472 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 DMPKQ09013 629 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 STX4Q12846 297 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 IL18R1Q13478 541 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 LRP8Q14114 963 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SIM2Q14190 667 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ARHGAP19Q14CB8 494 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TLR1Q15399 786 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF648Q5T619 568 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 OGFRL1Q5TC84 451 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TICAM1Q8IUC6 712 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ARMC8Q8IUR7 673 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 RBM12BQ8IXT5 1001 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TTC29Q8NA56 475 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ARMC5Q96C12 935 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MTERF3Q96E29 417 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 AURKBQ96GD4 344 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 LMLNQ96KR4 655 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SMIM14Q96QK8 99 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 EPHX3Q9H6B9 360 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FANCEQ9HB96 536 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM181Q9P2C4 612 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CCL26Q9Y258 94 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CFAP20Q9Y6A4 193 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 C17orf113A0A1B0GUU1 675 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TRIM43BA6NCK2 446 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MID1O15344 667 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 RGS10O43665 173 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GADD45GO95257 159 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CYP4B1P13584 511 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 NCBP2P52298 156 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CDH12P55289 794 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TUBA4AP68366 448 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 DGCR6Q14129 220 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GGTA1PQ4G0N0 100 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM35AQ53FP2 167 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 RBM48Q5RL73 367 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 DEPDC1Q5TB30 811 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CDC73Q6P1J9 531 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PGM2L1Q6PCE3 622 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PTCHD4Q6ZW05 846 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 IKBIPQ70UQ0 350 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZZZ3Q8IYH5 903 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF683Q8IZ20 524 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms