RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 KANK2Q63ZY3 851 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ANKS6Q68DC2 871 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 REP15Q6BDI9 236 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 LCN8Q6JVE9 175 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 KLHDC10Q6PID8 442 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ZNF783Q6ZMS7 281 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 SPATA24Q86W54 205 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 THNSL2Q86YJ6 484 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 GATAD2AQ86YP4 633 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 CROCCP3Q8IVE0 287 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 DENND6AQ8IWF6 608 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 FAM9CQ8IZT9 166 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 STK40Q8N2I9 435 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ELMOD1Q8N336 334 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 CARNMT1Q8N4J0 409 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 OR2T34Q8NGX1 318 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 OR2T3Q8NH03 318 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 SPATA22Q8NHS9 363 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 PSMG2Q969U7 264 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 KIAA1191Q96A73 305 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 C19orf60Q96EN9 201 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 CELF6Q96J87 481 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 RDH12Q96NR8 316 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 TRIB3Q96RU7 358 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 DDX50Q9BQ39 737 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 APOL2Q9BQE5 337 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 GPATCH1Q9BRR8 931 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ANKRD60Q9BZ19 345 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 SIK2Q9H0K1 926 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 CCDC68Q9H2F9 335 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 SDR39U1Q9NRG7 319 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 PIH1D1Q9NWS0 290 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 TAS2R13Q9NYV9 303 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ADA2Q9NZK5 511 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 HSFX1Q9UBD0 423 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 MYRFQ9Y2G1 1151 aa6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-202ENST00000368289 A0A087WXM4 84 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 A0A1W2PP18 115 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TRIM64CA6NLI5 447 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 C2orf81A6NN90 581 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 F5H423 210 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 H7C0S8 307 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 H7C4K7 107 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 SCDO00767 359 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 ANGPT2O15123 496 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 BCAT2O15382 392 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CD3EAPO15446 510 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CFLARO15519 480 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 LDB2O43679 373 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 KLK8O60259 260 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 NOBOXO60393 691 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 SNAP91O60641 907 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PRAMEF11O60813 436 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 KATNA1O75449 491 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 DNAJB5O75953 348 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 SUPT7LO94864 414 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TFAP2AP05549 437 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 UROSP10746 265 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 MSH3P20585 1137 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 SAT1P21673 171 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PSMA4P25789 261 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 YWHAQP27348 245 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CASRP41180 1078 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 GLRBP48167 497 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PPP3CCP48454 512 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TTPAP49638 278 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 STC1P52823 247 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PKNOX1P55347 436 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 NME5P56597 212 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 MRPS22P82650 360 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 MS4A2Q01362 244 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 LCP2Q13094 533 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 POLD3Q15054 466 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PDGFRLQ15198 375 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TAF1AQ15573 450 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 ZNF77Q15935 545 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TBR1Q16650 682 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 UGT3A2Q3SY77 523 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 MGAT5BQ3V5L5 792 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PDCD4Q53EL6 469 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 MS4A13Q5J8X5 152 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TXNDC8Q6A555 127 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CNSTQ6PJW8 725 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 AFTPHQ6ULP2 937 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CERS6Q6ZMG9 384 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 SCD5Q86SK9 330 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 ERI1Q8IV48 349 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TMEM151BQ8IW70 566 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 CHERPQ8IWX8 916 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 RBM12BQ8IXT5 1001 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 TBC1D21Q8IYX1 336 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 ATAD1Q8NBU5 361 aa6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 PAPD5Q8NDF8 572 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-202ENST00000368289 OR52E4Q8NGH9 312 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms