RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 NPIPA5E9PKD4 350 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 M0QX08 132 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 WRBO00258 174 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 PCLAFQ15004 111 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DPY19L1Q2PZI1 675 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 INAVAQ3KP66 663 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 IQCCQ4KMZ1 466 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DCUN1D3Q8IWE4 304 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 C2CD4AQ8NCU7 369 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 WDR12Q9GZL7 423 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 Q9N2J8 555 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 SERTAD3Q9UJW9 196 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 NPIPA1Q9UND3 350 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 RPL26L1Q9UNX3 145 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 TLR4O00206 839 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 PRSS56P0CW18 603 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CDK6Q00534 326 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 DGCR14Q96DF8 476 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 MUSKO15146 869 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
PTPRK-207ENST00000368226 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 CBFBQ13951 182 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 MTG2Q9H4K7 406 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 MAN2B2Q9Y2E5 1009 aa12.5□□□□□ -0.41
PTPRK-207ENST00000368226 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 CDC40O60508 579 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■□□□ 13.2
PTPRK-207ENST00000368226 TRMUO75648 421 aaKnown RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 SLC10A2Q12908 348 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 RIN1Q13671 783 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 E2F2Q14209 437 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 SLC35F1Q5T1Q4 408 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 GPAT4Q86UL3 456 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 WDTC1Q8N5D0 677 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.49□□□□□ -0.415e-8■■□□□ 12
PTPRK-207ENST00000368226 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF840PA6NDX5 716 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 PLD2O14939 933 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 STC2O76061 302 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 CA3P07451 260 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 DECR1Q16698 335 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 SYT16Q17RD7 645 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF613Q6PF04 617 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 PLET1Q6UQ28 207 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 KRTCAP2Q8N6L1 136 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 AQP11Q8NBQ7 271 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 MOCS1Q9NZB8 636 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 HYKKA2RU49 373 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 H1F0P07305 194 aaKnown RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 MAP3K8P41279 467 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 WNT7BP56706 349 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF678Q5SXM1 525 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 YIPF7Q8N8F6 280 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 TNFAIP8L1Q8WVP5 186 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 HSH2DQ96JZ2 352 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 CXorf21Q9HAI6 301 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 DPPA5A6NC42 116 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ARHGDIBP52566 201 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 KNDC1Q76NI1 1749 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 HSPBAP1Q96EW2 488 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 SLC2A4RGQ9NR83 387 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 TRNAU1APQ9NX07 287 aaKnown RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 J3QLW9 94 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF19P17023 458 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 RPS21P63220 83 aaKnown RBP12.49□□□□□ -0.41
PTPRK-207ENST00000368226 DHCR24Q15392 516 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 SLC7A8Q9UHI5 535 aa12.49□□□□□ -0.41
PTPRK-207ENST00000368226 LOC100509620A0A075B734 347 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 KAT7O95251 611 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 CD70P32970 193 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 PXNP49023 591 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 PSAPL1Q6NUJ1 521 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 FAM180BQ6P0A1 224 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 ARL9Q6T311 187 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 LRCH3Q96II8 777 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 COQ9O75208 318 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 DHFRP00374 187 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 PGAM2P15259 253 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 NOXRED1Q6NXP6 359 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 CEP97Q8IW35 865 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 PNPLA1Q8N8W4 532 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms