RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ZNF8P17098 575 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 ENGP17813 658 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 CXCR2P25025 360 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 TFF2Q03403 129 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 TAP2Q03519 686 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SLBPQ14493 270 aaKnown RBP eCLIP13.5□□□□□ -0.25
USF1-202ENST00000368020 STARD3Q14849 445 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 TEAD4Q15561 434 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 CYP2A13Q16696 494 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 VMACQ2NL98 169 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 CCSMST1Q4G0I0 132 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 OTUD3Q5T2D3 398 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 TMEM214Q6NUQ4 689 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 NXPE4Q6UWF7 544 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ZNF621Q6ZSS3 439 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 LRRTM4Q86VH4 590 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 RAB42Q8N4Z0 105 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 OXR1Q8N573 874 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ASPSCR1Q9BZE9 553 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 OR52A5Q9H2C5 316 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SLC6A13Q9NSD5 602 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ATP6V1HQ9UI12 483 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 BAG5Q9UL15 447 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 WBP11Q9Y2W2 641 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 CKAP5Q14008 2032 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 KRT87PA6NCN2 255 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 ENO4A6NNW6 628 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 E2F6O75461 281 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 KAT7O95251 611 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 MT-ND1P03886 318 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 APODP05090 189 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 GNAO1P09471 354 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 GLULP15104 373 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 IL9P15248 144 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 OPRD1P41143 372 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 IL12RB1P42701 662 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 CDKN2CP42773 168 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 METAP1P53582 386 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 RAD23AP54725 363 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 WNT3P56703 355 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
USF1-202ENST00000368020 VAC14Q08AM6 782 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 IL18R1Q13478 541 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 PYCR3Q53H96 274 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 GPR155Q7Z3F1 870 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 TRIM74Q86UV6 250 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 ZNF547Q8IVP9 402 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 LRRC56Q8IYG6 542 aaPredicted RBP13.49□□□□□ -0.25
USF1-202ENST00000368020 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 NETO1Q8TDF5 533 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 GFM2Q969S9 779 aaKnown RBP13.49□□□□□ -0.25
USF1-202ENST00000368020 RAD21L1Q9H4I0 556 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 DMRT3Q9NQL9 472 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 AHSPQ9NZD4 102 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 ASF1AQ9Y294 204 aa13.49□□□□□ -0.25
USF1-202ENST00000368020 VILLO15195 856 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 DPM1O60762 260 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 SNAP29O95721 258 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 GSNP06396 782 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 PTX3P26022 381 aaPredicted RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 GSTM5P46439 218 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 RAE1P78406 368 aaKnown RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 PPP2R2BQ00005 443 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 MESP2Q0VG99 397 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 CNTN1Q12860 1018 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 ZC3H12BQ5HYM0 836 aaKnown RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 PIP5KL1Q5T9C9 394 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 ZCCHC8Q6NZY4 707 aaKnown RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 CRTC3Q6UUV7 619 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 C8orf59Q8N0T1 100 aaPredicted RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 GOT1L1Q8NHS2 421 aaPredicted RBP13.48□□□□□ -0.25
USF1-202ENST00000368020 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 PELI2Q9HAT8 420 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 TPT1P8Q9HAU6 139 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 MYNNQ9NPC7 610 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 SLC2A4RGQ9NR83 387 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 BLOC1S6Q9UL45 172 aa13.48□□□□□ -0.25
USF1-202ENST00000368020 GABRR3A8MPY1 467 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 PLOD2O00469 737 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 KMOO15229 486 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 KCNK5O95279 499 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ERGP11308 486 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 C5AR1P21730 350 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CDK3Q00526 305 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 LSAMPQ13449 338 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TDGQ13569 410 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ENPP2Q13822 863 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 NFE2L1Q14494 772 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms