RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 INAQ16352 499 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 NKG7Q16617 165 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ADPRMQ3LIE5 342 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TRIM61Q5EBN2 209 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CTSL3PQ5NE16 218 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SLX4IPQ5VYV7 408 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CPZQ66K79 652 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 KDM4DQ6B0I6 523 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 GTF2H2CQ6P1K8 395 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ERICH5Q6P6B1 374 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SLC23A3Q6PIS1 610 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ENPP6Q6UWR7 440 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 GLT6D1Q7Z4J2 308 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SNX20Q7Z614 316 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TMEM25Q86YD3 366 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SYT12Q8IV01 421 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 BBS7Q8IWZ6 715 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TMEM132CQ8N3T6 1108 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 KDF1Q8NAX2 398 aaPredicted RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 FIG4Q92562 907 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 NTMT1Q9BV86 223 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CEP44Q9C0F1 390 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 P2RY12Q9H244 342 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ARMC7Q9H6L4 198 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CARS2Q9HA77 564 aaKnown RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 TMEM165Q9HC07 324 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SPHK2Q9NRA0 654 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 OSGIN1Q9UJX0 560 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 PILRBQ9UKJ0 227 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 OARD1Q9Y530 152 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 POLR3HQ9Y535 204 aaPredicted RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 SCN8AQ9UQD0 1980 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 H0Y626 953 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PRMT5O14744 637 aaPredicted RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 MUSKO15146 869 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 RGS10O43665 173 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 SNX4O95219 450 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 TRIM16O95361 564 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PTTG1O95997 202 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 SEMG1P04279 462 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PGRP06401 933 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 EBLN1P0CF75 366 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PABPC1P11940 636 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 AGXTP21549 392 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 IGFBP5P24593 272 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 CD6P30203 668 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 SERPINB1P30740 379 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 GNPDA1P46926 289 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 RGS4P49798 205 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 HTR6P50406 440 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 ZNF45Q02386 682 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 ZNF33BQ06732 778 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 LMAN2Q12907 356 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 GALNT3Q14435 633 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 CLCA4Q14CN2 919 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PHKG1Q16816 387 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 UNQ6494/PRO21346Q6UXR6 183 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 HTR3DQ70Z44 454 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PIWIL3Q7Z3Z3 882 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 MILR1Q7Z6M3 343 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 TSPYL5Q86VY4 417 aaPredicted RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 MIB1Q86YT6 1006 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 MSRB3Q8IXL7 192 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 NAT16Q8N8M0 369 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 OR4F6Q8NGB9 312 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 OR4K2Q8NGD2 314 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 OR10A6Q8NH74 314 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 FBXO30Q8TB52 745 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 ZFP90Q8TF47 636 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 HMGB4Q8WW32 186 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 USP7Q93009 1102 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 TESCQ96BS2 214 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 SPACA7Q96KW9 195 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 MAGEB10Q96LZ2 347 aaPredicted RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 ACOX2Q99424 681 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 SPATA9Q9BWV2 254 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 DGCR6LQ9BY27 220 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 NXF2Q9GZY0 626 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 DSN1Q9H410 356 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 RDH14Q9HBH5 336 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 PLCXD1Q9NUJ7 323 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.14□□□□□ -0.63
USF1-201ENST00000368019 NPAP1Q9NZP6 1156 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 KLHL42Q9P2K6 505 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 DEC1Q9P2X7 70 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 RPS6KA6Q9UK32 745 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
USF1-201ENST00000368019 ZNF232Q9UNY5 417 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 DGKBQ9Y6T7 804 aa11.14□□□□□ -0.63
USF1-201ENST00000368019 V9GYQ6 96 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms