RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 FAM172BPA6NC97 362 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 PAPLNO95428 1278 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 CLDN7O95471 211 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 ANXA5P08758 320 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 S100A3P33764 101 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 CSKP41240 450 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 CDKN2CP42773 168 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 ABRQ12979 859 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 GRIN2CQ14957 1233 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 LAPTM4AQ15012 233 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 SMN1Q16637 294 aaKnown RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 USP43Q70EL4 1123 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 LRRC70Q7Z2Q7 622 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 SERPINA11Q86U17 422 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 BEND7Q8N7W2 519 aaPredicted RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 SLC38A4Q969I6 547 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 BARD1Q99728 777 aaKnown RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 SLC32A1Q9H598 525 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 ZBTB20Q9HC78 741 aaPredicted RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 KCTD5Q9NXV2 234 aa14.22□□□□□ -0.13
PRKN-204ENST00000366896 ZNF106Q9H2Y7 1883 aaKnown RBP14.22□□□□□ -0.13
PRKN-204ENST00000366896 SMAD6O43541 496 aaKnown RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 DPM1O60762 260 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 FAM20BO75063 409 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 LCKP06239 509 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CYP4B1P13584 511 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 EPORP19235 508 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 TRPC1P48995 793 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ZNF45Q02386 682 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 SLC14A1Q13336 389 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ARHGEF7Q14155 803 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 MAD2L1BPQ15013 274 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 CHRNA6Q15825 494 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CPSF6Q16630 551 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRKN-204ENST00000366896 UBE2UQ5VVX9 321 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 RSBN1Q5VWQ0 802 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 CCBE1Q6UXH8 406 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 METTL4Q8N3J2 472 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 MAGEB10Q96LZ2 347 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 LYSMD1Q96S90 227 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 APOL4Q9BPW4 351 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 OR2B2Q9GZK3 357 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 NXF2Q9GZY0 626 aaKnown RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 TM9SF3Q9HD45 589 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 GMPPBQ9Y5P6 360 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 GLYATL1P3A0A0U1RQE8 302 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CENPBD1B2RD01 187 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CCNKO75909 580 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 PDYNP01213 254 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 BPIP17213 487 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 EFNA1P20827 205 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 TACR1P25103 407 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CCR2P41597 374 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CLK1P49759 484 aaKnown RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 DAPP51397 102 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CYP4F8P98187 520 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ZNF33BQ06732 778 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 TMEM184AQ6ZMB5 413 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ZNF551Q7Z340 670 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 HEATR4Q86WZ0 1026 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 HJURPQ8NCD3 748 aaPredicted RBP14.21□□□□□ -0.13
PRKN-204ENST00000366896 CMTM7Q96FZ5 175 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ITPAQ9BY32 194 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 ABCG8Q9H221 673 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 SFXN1Q9H9B4 322 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 IL1RAPQ9NPH3 570 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 DZANK1Q9NVP4 752 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 CRLS1Q9UJA2 301 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 SNX6Q9UNH7 406 aa14.21□□□□□ -0.13
PRKN-204ENST00000366896 SCN8AQ9UQD0 1980 aa14.21□□□□□ -0.14
PRKN-204ENST00000366896 KCNE1BA0A087WTH5 132 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 A0A1W2PRU2 124 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 HAT1O14929 419 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 LINC01565O15544 149 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 IDH3BO43837 385 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 GUCY1B2O75343 617 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 RHOP08100 348 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 GJA1P17302 382 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 GTF2E2P29084 291 aaKnown RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 HNF1BP35680 557 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 SPAM1P38567 509 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 PRKCDQ05655 676 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 MTAPQ13126 283 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 KRR1Q13601 381 aaKnown RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 KDM4DQ6B0I6 523 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 METTL3Q86U44 580 aaKnown RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 NXPE1Q8N323 547 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 L3MBTL4Q8NA19 623 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 IL17RDQ8NFM7 739 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 IPCEF1Q8WWN9 437 aaPredicted RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 MRPS31Q92665 395 aaKnown RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 FCRL1Q96LA6 429 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 DHRS1Q96LJ7 313 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 TSSK3Q96PN8 268 aa14.2□□□□□ -0.14
PRKN-204ENST00000366896 C6orf62Q9GZU0 229 aaPredicted RBP14.2□□□□□ -0.14
PRKN-204ENST00000366896 NDRG4Q9ULP0 352 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms