RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 IFI44Q8TCB0 444 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 RHBDD1Q8TEB9 315 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 ZDHHC12Q96GR4 267 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 C3orf30Q96M34 536 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 TGM7Q96PF1 710 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 HBEGFQ99075 208 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 C1GALT1Q9NS00 363 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 FTSJ1Q9UET6 329 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 ADGRE2Q9UHX3 823 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 LAMA5O15230 3695 aa19.77■□□□□ 0.76
SHISA4-201ENST00000362011 FEZF1A0PJY2 475 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 TLCD2A6NGC4 264 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 OR1F1O43749 312 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 PVRP15151 417 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 EZRP15311 586 aaKnown RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 CD1CP29017 333 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 GFERP55789 205 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 FCRL6Q6DN72 434 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 FAM92BQ6ZTR7 304 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 PLXDC1Q8IUK5 500 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 GBP7Q8N8V2 638 aaPredicted RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 TTLQ8NG68 377 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 CEP70Q8NHQ1 597 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 HUS1BQ8NHY5 278 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 BAHD1Q8TBE0 780 aaPredicted RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 ACTRT2Q8TDY3 377 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 TUBGCP3Q96CW5 907 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 PPM1MQ96MI6 270 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 OR52B2Q96RD2 323 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 CCDC3Q9BQI4 270 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 SARGQ9BW04 601 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 RHBGQ9H310 441 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 BRF2Q9HAW0 419 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 MN1Q10571 1320 aaPredicted RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 ITPR1Q14643 2758 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 ATP6AP2A0A1C7CYW4 349 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 FOXE1O00358 373 aaPredicted RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 ATP6AP2O75787 350 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 FTH1P19P0C7X4 201 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 GSTM2P28161 218 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 PIK3CBP42338 1070 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 SCTRP47872 440 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 RPS15AP62244 130 aaKnown RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 TUBB3Q13509 450 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 NR6A1Q15406 480 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 LSM12Q3MHD2 195 aaKnown RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 PLD3Q8IV08 490 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 NAXDQ8IW45 347 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 C19orf47Q8N9M1 422 aaKnown RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 OR2T11Q8NH01 316 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 TRAPPC9Q96Q05 1148 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 MTERF1Q99551 399 aaKnown RBP19.76■□□□□ 0.75
SHISA4-201ENST00000362011 MAP3K3Q99759 626 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 KLHL25Q9H0H3 589 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 DMRT3Q9NQL9 472 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 HEY2Q9UBP5 337 aa19.76■□□□□ 0.75
SHISA4-201ENST00000362011 NBEAQ8NFP9 2946 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 COL27A1Q8IZC6 1860 aaPredicted RBP19.75■□□□□ 0.75
SHISA4-201ENST00000362011 MAGEB17A8MXT2 336 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 LCMT2O60294 686 aaKnown RBP19.75■□□□□ 0.75
SHISA4-201ENST00000362011 NRP2O60462 931 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 C9P02748 559 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 ST6GAL1P15907 406 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 CKMT2P17540 419 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 CSF2RBP32927 897 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 AHRP35869 848 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 BCL6P41182 706 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 RPS13P62277 151 aaKnown RBP19.75■□□□□ 0.75
SHISA4-201ENST00000362011 CCL7P80098 99 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 RELAQ04206 551 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 SQSTM1Q13501 440 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 ADNP2Q6IQ32 1131 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 WDR74Q6RFH5 385 aaPredicted RBP19.75■□□□□ 0.75
SHISA4-201ENST00000362011 Q6ZSR9 355 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 LARP4Q71RC2 724 aaKnown RBP eCLIP19.75■□□□□ 0.75
SHISA4-201ENST00000362011 CARFQ8N187 725 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 RNF175Q8N4F7 328 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 ANKRD53Q8N9V6 530 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 MFSD9Q8NBP5 474 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 PPP3R2Q96LZ3 170 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 ACPTQ9BZG2 426 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 LRRN3Q9H3W5 708 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 AKTIPQ9H8T0 292 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 PPT2Q9UMR5 302 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 PCDHGA4Q9Y5G9 962 aa19.75■□□□□ 0.75
SHISA4-201ENST00000362011 FASNP49327 2511 aaKnown RBP19.74■□□□□ 0.75
SHISA4-201ENST00000362011 ANKRD11Q6UB99 2663 aaPredicted RBP19.74■□□□□ 0.75
SHISA4-201ENST00000362011 RSL1D1O76021 490 aaKnown RBP19.74■□□□□ 0.75
SHISA4-201ENST00000362011 DKK1O94907 266 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 LBPP18428 481 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 CYP4F2P78329 520 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 HMGCS1Q01581 520 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 CFHR1Q03591 330 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 ATP6AP1LQ52LC2 224 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 USP53Q70EK8 1073 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 THAP11Q96EK4 314 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 DPYSL5Q9BPU6 564 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 ZFP69BQ9UJL9 534 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 SLC12A4Q9UP95 1085 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms