RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 GPR62Q9BZJ7 368 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 ERVK-18Q9QC07 812 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 FBXL21Q9UKT6 434 aa13.3□□□□□ -0.28
VCP-201ENST00000358901 OR6C70A6NIJ9 312 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 AKAP8O43823 692 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 CD72P21854 359 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 FDXRP22570 491 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 GLDCP23378 1020 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 HTR6P50406 440 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ERVK-21P61565 698 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 SMPDL3AQ92484 453 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF224Q9NZL3 707 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 WNT6Q9Y6F9 365 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 WWP2O00308 870 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 MT-ND2P03891 347 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 HSD17B1P14061 328 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 SMSP52788 366 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 TXNL4AP83876 142 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 HACD2Q6Y1H2 254 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 KLHL36Q8N4N3 616 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 HERVK_113Q902F9 699 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 WDR26Q9H7D7 661 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 TIGARQ9NQ88 270 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 IL36AQ9UHA7 158 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 H0YJX3 145 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF623O75123 536 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 EEDO75530 441 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 C7P10643 843 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF30P17039 623 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF8P17098 575 aaPredicted RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 AP3S2P59780 193 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 RAB8AP61006 207 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 PHC1P78364 1004 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 LASP1Q14847 261 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 HDDC3Q8N4P3 179 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 POF1BQ8WVV4 589 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 TMIGD2Q96BF3 282 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 RNF31Q96EP0 1072 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 PAK6Q9NQU5 681 aaPredicted RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 MRTO4Q9UKD2 239 aaKnown RBP13.29□□□□□ -0.28
VCP-201ENST00000358901 MKLN1Q9UL63 735 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 SLC45A1Q9Y2W3 748 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 PCDHGA7Q9Y5G6 932 aa13.29□□□□□ -0.28
VCP-201ENST00000358901 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 A0A075B6Q4 140 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 REM1O75628 298 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 PFKMP08237 780 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.281e-13■■□□□ 11.6
VCP-201ENST00000358901 HNF1BP35680 557 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 ARFIP1P53367 373 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 SLC13A2Q13183 592 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 C6orf183Q5T699 404 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 CHST4Q8NCG5 386 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 CAPNS2Q96L46 248 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 RANBP9Q96S59 729 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 HERC2P3Q9BVR0 1158 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 SMG9Q9H0W8 520 aaKnown RBP13.28□□□□□ -0.28
VCP-201ENST00000358901 NEK6Q9HC98 313 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 UTS2RQ9UKP6 389 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 A0A096LPI6 279 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 INPPL1O15357 1258 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 MMP20O60882 483 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 PDYNP01213 254 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 CSF2P04141 144 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 GSTM3P21266 225 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 PM20D1Q6GTS8 502 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
VCP-201ENST00000358901 PRSS58Q8IYP2 241 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 ATP6V1C2Q8NEY4 427 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 LGALS12Q96DT0 336 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 CHIAQ9BZP6 476 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 DSN1Q9H410 356 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 POLE4Q9NR33 117 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 EMCNQ9ULC0 261 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 MID1O15344 667 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 GRK6P43250 576 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 SEC13P55735 322 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 ANKDD1AQ495B1 522 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 ZFAND4Q86XD8 727 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 TTLQ8NG68 377 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 SLC5A11Q8WWX8 675 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 TMED9Q9BVK6 235 aa13.28□□□□□ -0.28
VCP-201ENST00000358901 TDP1Q9NUW8 608 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms