RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PCDHA9Q9Y5H5 950 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 BTN3A3O00478 584 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 OR1F1O43749 312 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SERPINB7O75635 380 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 CLPXO76031 633 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 C7P10643 843 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SRCP12931 536 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 AGXTP21549 392 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TAS2R50P59544 299 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 MFSD2AQ8NA29 543 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF420Q8TAQ5 688 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TMEM9Q9P0T7 183 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ERVK-18Q9QC07 812 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 RHCGQ9UBD6 479 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TRBV23OR9-2A0A075B6M9 112 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 FADS2P1A8MWK0 482 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 C6orf47O95873 294 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 PRKACBP22694 351 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TMEM115Q12893 351 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SLC13A2Q13183 592 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ZSWIM7Q19AV6 140 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SLC36A3Q495N2 470 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 RFLNAQ6ZTI6 216 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SNX29P2Q8IUI4 249 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ZZZ3Q8IYH5 903 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 NFKBIDQ8NI38 313 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 MAL2Q969L2 176 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SCRN2Q96FV2 425 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF607Q96SK3 696 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 CLEC4MQ9H2X3 399 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 FAM120CQ9NX05 1096 aaKnown RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SLC9A8Q9Y2E8 581 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 PEX11BO96011 259 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 DCTP40126 519 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 CYBRD1Q53TN4 286 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 NHSL2Q5HYW2 709 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 SLC8B1Q6J4K2 584 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 NARS2Q96I59 477 aaKnown RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 CCM2Q9BSQ5 444 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 FAIM2Q9BWQ8 316 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 ZDHHC4Q9NPG8 344 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 LHX3Q9UBR4 397 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 RFPL2O75678 378 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 POP7O75817 140 aaKnown RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 NAT1P18440 290 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 COL9A2Q14055 689 aaPredicted RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 MBTPS1Q14703 1052 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 TIGD6Q17RP2 521 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 C9orf64Q5T6V5 341 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 FAM180BQ6P0A1 224 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 GRPEL2Q8TAA5 225 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 SLCO4A1Q96BD0 722 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 GFM1Q96RP9 751 aaKnown RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 ACPTQ9BZG2 426 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 SPRTNQ9H040 489 aaPredicted RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 RETREG1Q9H6L5 497 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 TLR9Q9NR96 1032 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 HEBP1Q9NRV9 189 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 ERVK-11Q9UQG0 969 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 H3BMQ9 156 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 MMP20O60882 483 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 GUCY1B2O75343 617 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 CCNB2O95067 398 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 SPINT3P49223 89 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 MMAAQ8IVH4 418 aaKnown RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 GTF2H4Q92759 462 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 COG8Q96MW5 612 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 EFCAB11Q9BUY7 163 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 NPLQ9BXD5 320 aaPredicted RBP11.85□□□□□ -0.51
COL20A1-201ENST00000358894 PCDHGA8Q9Y5G5 932 aa11.85□□□□□ -0.51
COL20A1-201ENST00000358894 PI15O43692 258 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 UGT2B17O75795 530 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 C9P02748 559 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 LAMP1P11279 417 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 TACR1P25103 407 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CCR7P32248 378 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CLCN7P51798 805 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CDK6Q00534 326 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 MXD1Q05195 221 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 IL18R1Q13478 541 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms