RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MYOM1P52179 1685 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF670-ZNF695F2Z2N8 137 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PENKP01210 267 aaPredicted RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 TBRG1Q3YBR2 411 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PRSS55Q6UWB4 352 aaPredicted RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 MTMR14Q8NCE2 650 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 FNDC8Q8TC99 324 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF675Q8TD23 568 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 CD180Q99467 661 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 BMP8BP34820 402 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 EIF2S3P41091 472 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 PTCHD3Q3KNS1 767 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 VITQ6UXI7 678 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 BMP8AQ7Z5Y6 402 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 NPY6RQ99463 290 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 DNAJC27Q9NZQ0 273 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 RNF11Q9Y3C5 154 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ATRNL1Q5VV63 1379 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SDHDO14521 159 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 IGFBP4P22692 258 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 RPS3P23396 243 aaKnown RBP eCLIP14.4□□□□□ -0.12e-6■■■■□ 25.3
CHD4-201ENST00000357008 ACVRL1P37023 503 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SEC23BQ15437 767 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 MYLK3Q32MK0 819 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 FAM76BQ5HYJ3 339 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 PMEPA1Q969W9 287 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 S100A16Q96FQ6 103 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 ASPNQ9BXN1 380 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CD244Q9BZW8 370 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 NSUN3Q9H649 340 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 TAS2R10Q9NYW0 307 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CACNG4Q9UBN1 327 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ERI3O43414 337 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 SOX14O95416 240 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CH25HO95992 272 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 PRKCGP05129 697 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 VAMP2P63027 116 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CTC1Q2NKJ3 1217 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 FAM182AQ5T1J6 154 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ATG9BQ674R7 924 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 TMCO2Q7Z6W1 182 aaPredicted RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 YIPF7Q8N8F6 280 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 FBXO15Q8NCQ5 510 aaPredicted RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 C12orf42Q96LP6 360 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 GIMAP2Q9UG22 337 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 UTS2RQ9UKP6 389 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SLC19A2O60779 497 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 HTR1EP28566 365 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 PRKCDQ05655 676 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SERINC3Q13530 473 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 BTBD16Q32M84 506 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 C6orf136Q5SQH8 315 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 TMEM236Q5W0B7 351 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 TCEANCQ8N8B7 351 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 MS4A12Q9NXJ0 267 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 C2orf92A0A1B0GVN3 265 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 E7ESA3 106 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 DENRO43583 198 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 HOXD13P35453 343 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 PSMA6P60900 246 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 KCNC4Q03721 635 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SHQ1Q6PI26 577 aaKnown RBP14.4□□□□□ -0.1
CHD4-201ENST00000357008 BRAT1Q6PJG6 821 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ZNF227Q86WZ6 799 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CCDC28AQ8IWP9 274 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 ZNF527Q8NB42 609 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 KCNJ9Q92806 393 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 PEBP4Q96S96 227 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 CDH10Q9Y6N8 788 aa14.4□□□□□ -0.1
CHD4-201ENST00000357008 SH3PXD2BA1X283 911 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 CSF2P04141 144 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 HNRNPA0Q13151 305 aaKnown RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 LAPTM4AQ15012 233 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ABHD13Q7L211 337 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ZNF366Q8N895 744 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 OR56A1Q8NGH5 318 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 PMM1Q92871 262 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ZNF382Q96SR6 550 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 PEX10O60683 326 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 RPP14O95059 124 aaKnown RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 CLUP10909 449 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 GADD45AP24522 165 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 CCKBRP32239 447 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ST3GAL4Q11206 333 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 OR2AP1Q8NGE2 309 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 TRUB1Q8WWH5 349 aaKnown RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 TM9SF2Q99805 663 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 KCTD3Q9Y597 815 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 CAPN5O15484 640 aaPredicted RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 CHRNA1P02708 482 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 MT-ND5P03915 603 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 JUNP05412 331 aaKnown RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 CXCR1P25024 350 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 MAPK3P27361 379 aaPredicted RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 DIO3P55073 304 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 TPGS2Q68CL5 300 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms