RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 NEDD8Q15843 81 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 COL13A1Q5TAT6 717 aaPredicted RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 REP15Q6BDI9 236 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ZDHHC24Q6UX98 284 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 CLEC1AQ8NC01 280 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SSU72Q9NP77 194 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 B3GAT2Q9NPZ5 323 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ATXN10Q9UBB4 475 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 TMED5Q9Y3A6 229 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 FADS2P1A8MWK0 482 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ACOT7O00154 380 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 S1PR4O95977 384 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 AGTR2P50052 363 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SLAMF1Q13291 335 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 NNATQ16517 81 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 GFOD2Q3B7J2 385 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 IFI44LQ53G44 452 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 BTN2A1Q7KYR7 527 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 FBXW8Q8N3Y1 598 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 OR4C6Q8NH72 309 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SLC22A8Q8TCC7 542 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 EPYCQ99645 322 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 POPDC3Q9HBV1 291 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 IL26Q9NPH9 171 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 THAP10Q9P2Z0 257 aaPredicted RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SSC5DA1L4H1 1573 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SHISA7A6NL88 538 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SCO2O43819 266 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 P04436 131 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 HOXB6P17509 224 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 RANBP1P43487 201 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 LEPRP48357 1165 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 MTPNP58546 118 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 DGCR6Q14129 220 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ZNF311Q5JNZ3 666 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 PIH1D2Q8WWB5 315 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 EFHD2Q96C19 240 aaPredicted RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 ZFYVE21Q9BQ24 234 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 ALG2Q9H553 416 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 SPO11Q9Y5K1 396 aa9.38□□□□□ -0.91
GABPA-201ENST00000354828 MYH9P35579 1960 aaKnown RBP9.38□□□□□ -0.91
GABPA-201ENST00000354828 SCELO95171 688 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 FCHO2Q0JRZ9 810 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 PTGES3Q15185 160 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 DUS1LQ6P1R4 473 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 LINC01465Q8N7H1 131 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 AGBL5Q8NDL9 886 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 FAR1Q8WVX9 515 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 F2RL3Q96RI0 385 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 IFT27Q9BW83 186 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 PLEKHA1Q9HB21 404 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 PLCL2Q9UPR0 1127 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 TESMINQ9Y4I5 508 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 PSAT1Q9Y617 370 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 G3V2T6 193 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 YKT6O15498 198 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 DUOXA1Q1HG43 343 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 LIPJQ5W064 366 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 IZUMO1Q8IYV9 350 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 GHDCQ8N2G8 530 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 OR6N1Q8NGY5 312 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 ZSWIM3Q96MP5 696 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 FCRL3Q96P31 734 aaPredicted RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 PELOQ9BRX2 385 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 CRISPLD1Q9H336 500 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 CPNE7Q9UBL6 633 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 FZD4Q9ULV1 537 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 YBX2Q9Y2T7 364 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 MED31Q9Y3C7 131 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 ARHGEF33A8MVX0 844 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 STX16-NPEPL1H3BU86 382 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 hCG_2039718K7EN88 272 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 STX16O14662 325 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 AHSA1O95433 338 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 BCHEP06276 602 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 GDI2P50395 445 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 ARG2P78540 354 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 ZNF763Q0D2J5 394 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 BTBD16Q32M84 506 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 RPS27LQ71UM5 84 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 KRT77Q7Z794 578 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
GABPA-201ENST00000354828 PPP1R3BQ86XI6 285 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 CNTD1Q8N815 330 aa9.37□□□□□ -0.91
GABPA-201ENST00000354828 GPR26Q8NDV2 337 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms