RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 LIN52Q52LA3 116 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 PERM1Q5SV97 790 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 ENDOVQ8N8Q3 282 aaKnown RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 MZB1Q8WU39 189 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF285Q96NJ3 590 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 REEP4Q9H6H4 257 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 BRF2Q9HAW0 419 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF224Q9NZL3 707 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 GPN3Q9UHW5 284 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-201ENST00000350148 IKZF3Q9UKT9 509 aa11.77□□□□□ -0.53
SMAD9-201ENST00000350148 A0A1W2PQ72 361 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 MID1O15344 667 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 APBB3O95704 486 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 CRISP3P54108 245 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 MYBPC3Q14896 1274 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PARS2Q7L3T8 475 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 OR56A1Q8NGH5 318 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ANKRD49Q8WVL7 239 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 BORCS5Q969J3 196 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 RHBDF1Q96CC6 855 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 LYSMD1Q96S90 227 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 HBEGFQ99075 208 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 SPRTNQ9H040 489 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 C2orf74A8MZ97 194 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 THRBP10828 461 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 RPS9P46781 194 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 LRP8Q14114 963 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 NXPE4Q6UWF7 544 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TMC8Q8IU68 726 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 NPAS3Q8IXF0 933 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 NTMT1Q9BV86 223 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 BTBD3Q9Y2F9 522 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 RPS13P62277 151 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 CBLBQ13191 982 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 DGUOKQ16854 277 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 OR2A12Q8NGT7 310 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PNPT1Q8TCS8 783 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 MAPK15Q8TD08 544 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 MLXQ9UH92 298 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 KCNK6Q9Y257 313 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 FADS3Q9Y5Q0 445 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 MCM3APO60318 1980 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ARPC2O15144 300 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 UBXN7O94888 489 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PAK4O96013 591 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TGFB1P01137 390 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TIA1P31483 386 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PRLHRP49683 370 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 GSK3BP49841 420 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 CLDN8P56748 225 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 NOXRED1Q6NXP6 359 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 IKBIPQ70UQ0 350 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ENKURQ8TC29 256 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ELSPBP1Q96BH3 223 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 TIMM29Q9BSF4 260 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
SMAD9-201ENST00000350148 SUSD2Q9UGT4 822 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 FBXW2Q9UKT8 454 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 PLCL2Q9UPR0 1127 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 ACTL7AQ9Y615 435 aa11.76□□□□□ -0.53
SMAD9-201ENST00000350148 KRT87PA6NCN2 255 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 H3BNX3 289 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 MUSKO15146 869 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 NT5EP21589 574 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 GJA4P35212 333 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 RPS7P62081 194 aaKnown RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 HKDC1Q2TB90 917 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 PIANPQ8IYJ0 282 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 MINDY2Q8NBR6 621 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 UBTD2Q8WUN7 234 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 FAM3CQ92520 227 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 FOXJ1Q92949 421 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 ATOH8Q96SQ7 321 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 MOV10Q9HCE1 1003 aaKnown RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 MYCLP1P12525 358 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 CR2P20023 1033 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 HNRNPA2B1P22626 353 aaKnown RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 PSMA3P25788 255 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 RBBP4Q09028 425 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF789Q5FWF6 425 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 XAGE5Q8WWM1 108 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 PTERQ96BW5 349 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 KCNA7Q96RP8 456 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 MAP4K5Q9Y4K4 846 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms