RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CD1DP15813 335 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 MYH10P35580 1976 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 ID2Q02363 134 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 DUOXA1Q1HG43 343 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 TCTE1Q5JU00 501 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 RANBP10Q6VN20 620 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 P4HA3Q7Z4N8 544 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 AMIGO2Q86SJ2 522 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 ADGRG6Q86SQ4 1221 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 PRODH2Q9UF12 536 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 SPIN1Q9Y657 262 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 C9JVG2 144 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 E7ESA3 106 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 FHP07954 510 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 KCNC1P48547 511 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 KLHL24Q6TFL4 600 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 OR4K14Q8NGD5 310 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 THAP3Q8WTV1 239 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 LPGAT1Q92604 370 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 SLC39A13Q96H72 371 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 KCNC2Q96PR1 638 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 OSBPL11Q9BXB4 747 aa15.85■□□□□ 0.13
SMARCA4-201ENST00000344626 ELOA3DA6NLF2 546 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 KLF11O14901 512 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RSL1D1O76021 490 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RPS3P23396 243 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 MTTPP55157 894 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ADAM15Q13444 863 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ENPP2Q13822 863 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 FGL2Q14314 439 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 NR0B2Q15466 257 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 DEFB110Q30KQ9 67 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ELOA3BQ3SY89 546 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ELOA3Q8NG57 546 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 GPATCH1Q9BRR8 931 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 EPHA6Q9UF33 1036 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RAB28P51157 221 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ARMCX4Q5H9R4 360 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 IGDCC3Q8IVU1 814 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 FAM160A2Q8N612 972 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ZNF540Q8NDQ6 660 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RBM4BQ9BQ04 359 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RBM4Q9BWF3 364 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 LRIT1Q9P2V4 623 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 COL4A5P29400 1685 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 DDX60LQ5H9U9 1706 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ZNF763Q0D2J5 394 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 LIPIQ6XZB0 460 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 CACTIN-AS1Q8N1I8 211 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 GPRC5BQ9NZH0 403 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ENTPD2Q9Y5L3 495 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 GSC2O15499 205 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 CCNB2O95067 398 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 CXCR1P25024 350 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 EMX2Q04743 252 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 SLC9B1Q4ZJI4 515 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 RBM15BQ8NDT2 890 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ZNF671Q8TAW3 534 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 DEFB126Q9BYW3 111 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 METTL7AQ9H8H3 244 aa15.84■□□□□ 0.13
SMARCA4-201ENST00000344626 ACY1Q03154 408 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 NEDD8Q15843 81 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 MANEALQ5VSG8 457 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 C11orf88Q6PI97 169 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 FRMD7Q6ZUT3 714 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 CSNK1A1LQ8N752 337 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 MTERF3Q96E29 417 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 PSAT1Q9Y617 370 aa15.83■□□□□ 0.13
SMARCA4-201ENST00000344626 MBTPS2O43462 519 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 GRM7Q14831 915 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 DEFB134Q4QY38 66 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 LRRC3Q9BY71 257 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 FAM227AF5H4B4 570 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 CTSKP43235 329 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 STEAP4Q687X5 459 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 PTGFRNQ9P2B2 879 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 LAMB1P07942 1786 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 AKAP8O43823 692 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 JUNP05412 331 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 FDXRP22570 491 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 TBPL1P62380 186 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 TMEM35AQ53FP2 167 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 DKK3Q9UBP4 350 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 MMP17Q9ULZ9 603 aa15.83■□□□□ 0.12
SMARCA4-201ENST00000344626 KIR2DS5A0A0G2JLQ3 304 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 A0A0G2JNG1 304 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 KIR2DS3K7RE56 304 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 CLIC1O00299 241 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 ARSFP54793 590 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 CASP6P55212 293 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 KIR2DS5Q14953 304 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 BROXQ5VW32 411 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 OR4F3Q6IEY1 312 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 OR6C4Q8NGE1 309 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 CEP76Q8TAP6 659 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 ARRDC3Q96B67 414 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 DTD2Q96FN9 168 aa15.82■□□□□ 0.12
SMARCA4-201ENST00000344626 PTGES2Q9H7Z7 377 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms