RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 SPATA9Q9BWV2 254 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 SMG9Q9H0W8 520 aaKnown RBP11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 CHST8Q9H2A9 424 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 REEP1Q9H902 201 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 TPT1P8Q9HAU6 139 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 KRT84Q9NSB2 600 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 THUMPD1Q9NXG2 353 aaKnown RBP11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 PLXNA2O75051 1894 aa11.9□□□□□ -0.5
UBE2L3-201ENST00000342192 MYO1DO94832 1006 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 FKBP9O95302 570 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ZNF30P17039 623 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 GJA1P17302 382 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DCDC1P59894 354 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 RPS3AP61247 264 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DDX39BQ13838 428 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DOC2AQ14183 400 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CCDC58Q4VC31 144 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SYT6Q5T7P8 510 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 GRHL2Q6ISB3 625 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 GDPD4Q6W3E5 623 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 TSPYL5Q86VY4 417 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SCAMP4Q969E2 229 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 METTL2AQ96IZ6 378 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 PITX2Q99697 317 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CTRCQ99895 268 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 MYOCQ99972 504 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DUSP26Q9BV47 211 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 FAM83DQ9H4H8 585 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 TBC1D14Q9P2M4 693 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SLCO3A1Q9UIG8 710 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 A0A1W2PRU2 124 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 H0YIV9 168 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 DPM1O60762 260 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 MT-ND2P03891 347 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HSD3B1P14060 373 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HSD3B2P26439 372 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 MVKQ03426 396 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ADPRMQ3LIE5 342 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 IQCCQ4KMZ1 466 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 PDE12Q6L8Q7 609 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HSD11B1LQ7Z5J1 315 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SLCO6A1Q86UG4 719 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ATG16L2Q8NAA4 619 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 VMP1Q96GC9 406 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 RHNO1Q9BSD3 238 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 BTBD3Q9Y2F9 522 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 E9PQ18 207 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 RGS10O43665 173 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 GNRH1P01148 92 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 C9P02748 559 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 LAG3P18627 525 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 EPHA2P29317 976 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 VIPR1P32241 457 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 KRT20P35900 424 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 HNF4AP41235 474 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 BRAT1Q6PJG6 821 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 P2RY8Q86VZ1 359 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CCDC71Q8IV32 467 aaPredicted RBP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 KLHDC8AQ8IYD2 350 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ZNF540Q8NDQ6 660 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 NDNFQ8TB73 568 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 ATL1Q8WXF7 558 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 BRF2Q9HAW0 419 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 SIRT5Q9NXA8 310 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 BTNL2Q9UIR0 455 aa11.89□□□□□ -0.51
UBE2L3-201ENST00000342192 C1orf226A1L170 272 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 TMEM202A6NGA9 273 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 OR2AG2A6NM03 316 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 WASH3PC4AMC7 463 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 FAM20BO75063 409 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 FADS2O95864 444 aaKnown RBP11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 LRG1P02750 347 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 CYP2A6P11509 494 aaPredicted RBP11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 EFNA1P20827 205 aaPredicted RBP11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 ASMTP46597 345 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 CRYBA2P53672 197 aa11.88□□□□□ -0.51
UBE2L3-201ENST00000342192 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms