RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LHX9Q9NQ69 397 aa12.59□□□□□ -0.39
TUBD1-202ENST00000340993 GRID1Q9ULK0 1009 aa12.59□□□□□ -0.39
TUBD1-202ENST00000340993 RNF11Q9Y3C5 154 aa12.59□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
TUBD1-202ENST00000340993 SRRM3A6NNA2 597 aaPredicted RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 G3V2L1 256 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 OR7A17O14581 309 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 KLK8O60259 260 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 H2AFYO75367 372 aaKnown RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 KLK3P07288 261 aaPredicted RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 ATP5F1P24539 256 aaPredicted RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 RAB8AP61006 207 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 OLR1P78380 273 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 RASA2Q15283 850 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 SGO1Q5FBB7 561 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 TCTE1Q5JU00 501 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 ATG9BQ674R7 924 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 TLDC1Q6P9B6 456 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 LRIG3Q6UXM1 1119 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 EXOC3L1Q86VI1 746 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 C10orf107Q8IVU9 208 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 DSELQ8IZU8 1212 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 ESX1Q8N693 406 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 ANKRD42Q8N9B4 389 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 OR8K5Q8NH50 307 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 MGARPQ8TDB4 240 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 RBCK1Q9BYM8 510 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 GPN2Q9H9Y4 310 aaPredicted RBP12.58□□□□□ -0.39
TUBD1-202ENST00000340993 ZBTB26Q9HCK0 441 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 PADI1Q9ULC6 663 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 PCDHB3Q9Y5E6 796 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 KLK4Q9Y5K2 254 aa12.58□□□□□ -0.39
TUBD1-202ENST00000340993 TRBC2A0A5B9 178 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 SGK494L7N484 410 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 RPS17P08708 135 aaKnown RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF888P0CJ79 500 aaPredicted RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 H2AFXP16104 143 aaPredicted RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 ITGAXP20702 1163 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 HRH2P25021 359 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 STAT5AP42229 794 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 SCTRP47872 440 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 NEK2P51955 445 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 PCBP2Q15366 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 UNC50Q53HI1 259 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 TMIGD1Q6UXZ0 262 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 ZYG11AQ6WRX3 759 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 ZCCHC23Q6ZST2 131 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 DTX1Q86Y01 620 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 KLHDC8AQ8IYD2 350 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 KRT78Q8N1N4 520 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 TBC1D19Q8N5T2 526 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 OR4K1Q8NGD4 311 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 OR9A4Q8NGU2 314 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 COL26A1Q96A83 441 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 PTCD3Q96EY7 689 aaKnown RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 HBEGFQ99075 208 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 MTERF1Q99551 399 aaKnown RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 CHRNA10Q9GZZ6 450 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 HCN3Q9P1Z3 774 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 PLLPQ9Y342 182 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 TNPO3Q9Y5L0 923 aaKnown RBP12.58□□□□□ -0.4
TUBD1-202ENST00000340993 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.4
TUBD1-202ENST00000340993 A0A1B0GX78 115 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 C4orf51C9J302 202 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 STX16-NPEPL1H3BU86 382 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 STX16O14662 325 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 SRPX2O60687 465 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 CPA3P15088 417 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 CD82P27701 267 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 RORAP35398 523 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 NAGLUP54802 743 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 HERVK_113P63132 956 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 CXADRP78310 365 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 TLE3Q04726 772 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 PRTGQ2VWP7 1150 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 CCDC153Q494R4 210 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF678Q5SXM1 525 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ENDOVQ8N8Q3 282 aaKnown RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 KDF1Q8NAX2 398 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 KIAA1143Q96AT1 154 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 GBP5Q96PP8 586 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ERVK-6Q9BXR3 956 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 NLNQ9BYT8 704 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms