RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PRSS41Q7RTY9 318 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 VN1R4Q7Z5H5 301 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 OR51Q1Q8NH59 317 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 THAP3Q8WTV1 239 aaPredicted RBP14.75□□□□□ -0.05
LINC01116-202ENST00000339037 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 TRIM8Q9BZR9 551 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 CCDC68Q9H2F9 335 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 KCNK13Q9HB14 408 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 HCN3Q9P1Z3 774 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 KLHL42Q9P2K6 505 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 CTAGE9A4FU28 777 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 GFYI3L273 518 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 ZBTB14O43829 449 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 KIF5CO60282 957 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 AVILO75366 819 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 WISP2O76076 250 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 IL1RNP18510 177 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 AGAP20933 346 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 HRH2P25021 359 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 IMPA1P29218 277 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 EEF1DP29692 281 aaKnown RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 SKIV2L2P42285 1042 aaKnown RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 AGTR2P50052 363 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 SARNPP82979 210 aaKnown RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 ADORA2A-AS1P86434 159 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 EXT1Q16394 746 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 ARMC3Q5W041 872 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 TMEM214Q6NUQ4 689 aaKnown RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 H3F3CQ6NXT2 135 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 TTC27Q6P3X3 843 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 LRRC56Q8IYG6 542 aaPredicted RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 SHISA5Q8N114 240 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 MDS2Q8NDY4 140 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 GPR137Q96N19 417 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 SIGLEC12Q96PQ1 595 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 UTP23Q9BRU9 249 aaKnown RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 TSPAN10Q9H1Z9 355 aaPredicted RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 CCDC177Q9NQR7 707 aaPredicted RBP14.74□□□□□ -0.05
LINC01116-202ENST00000339037 KLHL1Q9NR64 748 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 ANKRD10Q9NXR5 420 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 SAMD15Q9P1V8 674 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 MED16Q9Y2X0 877 aa14.74□□□□□ -0.05
LINC01116-202ENST00000339037 MAP1AP78559 2803 aaPredicted RBP14.73□□□□□ -0.05
LINC01116-202ENST00000339037 KCNE1BA0A087WTH5 132 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 OR2W5A6NFC9 320 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 SGK494L7N484 410 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 F7P08709 466 aaPredicted RBP14.73□□□□□ -0.05
LINC01116-202ENST00000339037 MPC1LP0DKB6 136 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 BCL6P41182 706 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 TBPL1P62380 186 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 ALDH6A1Q02252 535 aaKnown RBP14.73□□□□□ -0.05
LINC01116-202ENST00000339037 GPS1Q13098 491 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 DHX34Q14147 1143 aaKnown RBP14.73□□□□□ -0.05
LINC01116-202ENST00000339037 OR1C1Q15619 314 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 MEP1AQ16819 746 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 ANKRD22Q5VYY1 191 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 ANKRD37Q7Z713 158 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 CRLF3Q8IUI8 442 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 CAMKVQ8NCB2 501 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 ZCCHC10Q8TBK6 192 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 M1APQ8TC57 530 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 USB1Q9BQ65 265 aaKnown RBP14.73□□□□□ -0.05
LINC01116-202ENST00000339037 MACROD1Q9BQ69 325 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 HES7Q9BYE0 225 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 ANKHQ9HCJ1 492 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 MMP25Q9NPA2 562 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 TMEM184CQ9NVA4 438 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 SCN2AQ99250 2005 aa14.73□□□□□ -0.05
LINC01116-202ENST00000339037 CACNA1CQ13936 2221 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 ASPDHA6ND91 283 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 CD96P40200 585 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 MAGEA6P43360 314 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 THOC5Q13769 683 aaKnown RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 ABRAXAS2Q15018 415 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 NSDHLQ15738 373 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 SPINK14Q6IE38 97 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 ZNF549Q6P9A3 640 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 UBE2R2Q712K3 238 aaPredicted RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 PIWIL4Q7Z3Z4 852 aaKnown RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 PCGF5Q86SE9 256 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 CAND1Q86VP6 1230 aaKnown RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 SPPL2CQ8IUH8 684 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 SPNS2Q8IVW8 549 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 DENND6AQ8IWF6 608 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 SLC5A8Q8N695 610 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 HORMAD2Q8N7B1 307 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 TMEM178AQ8NBL3 297 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 ZNF669Q96BR6 464 aaPredicted RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 SCMH1Q96GD3 660 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 MS4A14Q96JA4 679 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 FRMD6Q96NE9 622 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 LPAR4Q99677 370 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 PCBD2Q9H0N5 130 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 FBXO6Q9NRD1 293 aaPredicted RBP14.72□□□□□ -0.05
LINC01116-202ENST00000339037 ZNF835Q9Y2P0 537 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 DHRS7Q9Y394 339 aa14.72□□□□□ -0.05
LINC01116-202ENST00000339037 NCOA6Q14686 2063 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms