RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 IPCEF1Q8WWN9 437 aaPredicted RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CPEB1Q9BZB8 566 aaKnown RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 ITM2CQ9NQX7 267 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 QPCTLQ9NXS2 382 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 NPAP1Q9NZP6 1156 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 TBC1D14Q9P2M4 693 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CD84Q9UIB8 345 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 PCDHGA3Q9Y5H0 932 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CEBPBP17676 345 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 DGKAP23743 735 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 EPHA2P29317 976 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 IL1RL1Q01638 556 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 ZNF77Q15935 545 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 GTDC1Q4AE62 458 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 GPRC6AQ5T6X5 926 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 LYPLAL1Q5VWZ2 237 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 AHSA2Q719I0 299 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 SPATC1Q76KD6 591 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 TSPYL5Q86VY4 417 aaPredicted RBP18.14■□□□□ 0.5
PSPC1-201ENST00000338910 CALHM3Q86XJ0 350 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 SYTL1Q8IYJ3 562 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 NLGN4XQ8N0W4 816 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 ZBTB2Q8N680 514 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 AMER2Q8N7J2 671 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 CYB5D2Q8WUJ1 264 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 MARCH7Q9H992 704 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 FBXL12Q9NXK8 326 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 ZNF221Q9UK13 617 aa18.14■□□□□ 0.5
PSPC1-201ENST00000338910 CAB39Q9Y376 341 aaPredicted RBP18.14■□□□□ 0.5
PSPC1-201ENST00000338910 TRBV5-3A0A0A0MS03 114 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 FAM220BPB1ANY3 271 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 KMOO15229 486 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 RB1P06400 928 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 ALOX12P18054 663 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 POLR2EP19388 210 aaKnown RBP18.14■□□□□ 0.49
PSPC1-201ENST00000338910 HSPA7P48741 367 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 ABRAXAS2Q15018 415 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 CCDC71Q8IV32 467 aaPredicted RBP18.14■□□□□ 0.49
PSPC1-201ENST00000338910 ZDHHC21Q8IVQ6 265 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 C10orf111Q8N326 155 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 TTC29Q8NA56 475 aaPredicted RBP18.14■□□□□ 0.49
PSPC1-201ENST00000338910 ZNF707Q96C28 371 aaPredicted RBP18.14■□□□□ 0.49
PSPC1-201ENST00000338910 ZBTB18Q99592 522 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 TM9SF3Q9HD45 589 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 B4GALT6Q9UBX8 382 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 RNF6Q9Y252 685 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 CCL27Q9Y4X3 112 aa18.14■□□□□ 0.49
PSPC1-201ENST00000338910 NOTOA8MTQ0 251 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 SEC22BO75396 215 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 WBP4O75554 376 aaKnown RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 DBTP11182 482 aaKnown RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 GDF5P43026 501 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 GZMMP51124 257 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 PROX2Q3B8N5 592 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ATAD3CQ5T2N8 411 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ATG9BQ674R7 924 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 MACC1Q6ZN28 852 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 GOLGA7Q7Z5G4 137 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ADGRD2Q7Z7M1 963 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 C12orf76Q8N812 135 aaPredicted RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 OR7G1Q8NGA0 311 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 OR2A12Q8NGT7 310 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 EGFL8Q99944 293 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 C19orf43Q9BQ61 176 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 FAM126AQ9BYI3 521 aaPredicted RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 CCDC177Q9NQR7 707 aaPredicted RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 LATS2Q9NRM7 1088 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ELOVL2Q9NXB9 296 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 AP3M1Q9Y2T2 418 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 PPIL1Q9Y3C6 166 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 M0R082 166 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 GADD45AP24522 165 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 PCBP2Q15366 365 aaKnown RBP eCLIP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 SPANXN4Q5MJ08 99 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 FCGR1BQ92637 280 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 POP5Q969H6 163 aaKnown RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 UBE2FQ969M7 185 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 MCCC1Q96RQ3 725 aaPredicted RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 MTG2Q9H4K7 406 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 SLC6A13Q9NSD5 602 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 C1orf109Q9NX04 203 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ZMYM5Q9UJ78 669 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 ABCG2Q9UNQ0 655 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 PCDHGB6Q9Y5F9 930 aa18.13■□□□□ 0.49
PSPC1-201ENST00000338910 TNPO3Q9Y5L0 923 aaKnown RBP18.13■□□□□ 0.49
PSPC1-201ENST00000338910 AGAP14A8MT82 685 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 TAPBPO15533 448 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 SNX4O95219 450 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 PGRP06401 933 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 S100A5P33763 92 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 NSG1P42857 185 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 CTSKP43235 329 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 HTR3AP46098 478 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 RPL38P63173 70 aaKnown RBP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 GTF2H2Q13888 395 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 GTF2H2CQ6P1K8 395 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 GDPD4Q6W3E5 623 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms