RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 XKR5Q6UX68 686 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 GOT1L1Q8NHS2 421 aaPredicted RBP13.74□□□□□ -0.21
LIPA-202ENST00000336233 TRUB1Q8WWH5 349 aaKnown RBP13.74□□□□□ -0.21
LIPA-202ENST00000336233 REPS1Q96D71 796 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 MED8Q96G25 268 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 C7orf34Q96L11 122 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 RIBC2Q9H4K1 309 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 N6AMT1Q9Y5N5 214 aa13.74□□□□□ -0.21
LIPA-202ENST00000336233 hCG_2039718K7EN88 272 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 NDUFS2O75306 463 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 GABARAPO95166 117 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 SLC16A8O95907 504 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 ANXA4P09525 319 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 ZNF12P17014 697 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 NNMTP40261 264 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 RXRGP48443 463 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 CRYBA2P53672 197 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 LIPIQ6XZB0 460 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 LINC00299Q6ZSB3 139 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 HUS1BQ8NHY5 278 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 FOPNLQ96NB1 174 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 REEP1Q9H902 201 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 ZNF282Q9UDV7 671 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 B3GNT3Q9Y2A9 372 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 PADI2Q9Y2J8 665 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 BCAS1O75363 584 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 TIMP1P01033 207 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 C9P02748 559 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 CSF2RAP15509 400 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 SYN1P17600 705 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 PTPN2P17706 415 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 BMXP51813 675 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 C21orf59P57076 290 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 KCNJ10P78508 379 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 EMX1Q04741 257 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 AQP6Q13520 282 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 RGNQ15493 299 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 TEAD4Q15561 434 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 CTF1Q16619 201 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 TSPYL5Q86VY4 417 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 CYB5D2Q8WUJ1 264 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 PLEKHA8Q96JA3 519 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 DPH2Q9BQC3 489 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 GABARAPL3Q9BY60 117 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 CCNB1IP1Q9NPC3 277 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 EXD2Q9NVH0 621 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 SAMHD1Q9Y3Z3 626 aaKnown RBP13.73□□□□□ -0.21
LIPA-202ENST00000336233 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
LIPA-202ENST00000336233 TMEM247A6NEH6 219 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 FOXE1O00358 373 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 INMTO95050 263 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 MAPK10P53779 464 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 GAB1Q13480 694 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ELOAQ14241 798 aaKnown RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 KIAA1614Q5VZ46 1190 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 TTC29Q8NA56 475 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIPA-202ENST00000336233 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 AP2M1Q96CW1 435 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 COQ10AQ96MF6 247 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 EHD1Q9H4M9 534 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ADPRHL2Q9NX46 363 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 THUMPD1Q9NXG2 353 aaKnown RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 KCNE2Q9Y6J6 123 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 MYO1GB0I1T2 1018 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 TMEM229AB2RXF0 380 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 XPNPEP2O43895 674 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 FKBP9O95302 570 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 C1orf105O95561 183 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ELFN1P0C7U0 828 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ITGB8P26012 769 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 CD6P30203 668 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 MVKQ03426 396 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 SPCS2Q15005 226 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 HKDC1Q2TB90 917 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 ANKDD1AQ495B1 522 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 DUS1LQ6P1R4 473 aaKnown RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 LAS2Q8IYD9 372 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 LILRA3Q8N6C8 439 aaPredicted RBP13.72□□□□□ -0.21
LIPA-202ENST00000336233 YIPF6Q96EC8 236 aa13.72□□□□□ -0.21
LIPA-202ENST00000336233 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms