RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PCDHGB2Q9Y5G2 931 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GRM6O15303 877 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RHOQP17081 205 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 UGT2B10P36537 528 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CHRNA4P43681 627 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 NKX6-1P78426 367 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GPR68Q15743 365 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ATP6AP1Q15904 470 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 WASH2PQ6VEQ5 465 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF696Q9H7X3 374 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 POT1Q9NUX5 634 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 IFT52Q9Y366 437 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PCDHGA8Q9Y5G5 932 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 A0A1B0GVM2 712 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 INSIG1O15503 277 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PROM1O43490 865 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ESR1P03372 595 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 IL3P08700 152 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GRM5P41594 1212 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PTGER3P43115 390 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 MASP1P48740 699 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 SLC18A1P54219 525 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PRMT2P55345 433 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GTF2IRD2BQ6EKJ0 949 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF529Q6P280 563 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GTF2IRD2Q86UP8 949 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 LRRC52Q8N7C0 313 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 NEIL3Q8TAT5 605 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PRICKLE1Q96MT3 831 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TRMT61BQ9BVS5 477 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RNF121Q9H920 327 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PCDHB16Q9NRJ7 776 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TLR6Q9Y2C9 796 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CLDN4O14493 209 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 SLC7A4O43246 635 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RCBTB2O95199 551 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PAK4O96013 591 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CXCR1P25024 350 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GLP1RP43220 463 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 SEC13P55735 322 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TAF1AQ15573 450 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 DCAF12L1Q5VU92 463 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TSPAN33Q86UF1 283 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CARM1Q86X55 608 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CPNE8Q86YQ8 564 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 FTMTQ8N4E7 242 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 C4orf32Q8N8J7 132 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 POC1BQ8TC44 478 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 LGALS12Q96DT0 336 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 C16orf58Q96GQ5 468 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RBM18Q96H35 190 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 OR10A4Q9H209 315 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CNTNAP1P78357 1384 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 KLF11O14901 512 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.88
COL4A6-201ENST00000334504 TXNL1O43396 289 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 SGCEO43556 437 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 ALDH3B1P43353 468 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 RELAQ04206 551 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 NTRK2Q16620 822 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 GPRC6AQ5T6X5 926 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 C22orf42Q6IC83 251 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 PNCKQ6P2M8 343 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 KCT2Q8NC54 265 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 FBXO15Q8NCQ5 510 aaPredicted RBP9.52□□□□□ -0.88
COL4A6-201ENST00000334504 CCDC106Q9BWC9 280 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 ACTR6Q9GZN1 396 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 QPCTLQ9NXS2 382 aa9.52□□□□□ -0.88
COL4A6-201ENST00000334504 OR51F1A6NGY5 319 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF254O75437 659 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 SMIM10L2AP0DMW4 78 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 SMIM10L2BP0DMW5 78 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 ADH6P28332 368 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 FGL1Q08830 312 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 GK2Q14410 553 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 POU4F3Q15319 338 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 C6orf141Q5SZD1 244 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 KIAA0930Q6ICG6 404 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 CCDC32Q9BV29 185 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 PBDC1Q9BVG4 233 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 H7C417 338 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 B3GALT2O43825 422 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 RBBP9O75884 186 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 STBD1O95210 358 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 CST3P01034 146 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 MRPL3P09001 348 aaKnown RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 SLC35G6P0C7Q6 338 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 TACR2P21452 398 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 IL32P24001 234 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 GRIA2P42262 883 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 CAMLGP49069 296 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 HADHBP55084 474 aaKnown RBP9.52□□□□□ -0.89
COL4A6-201ENST00000334504 AKR1C8PQ5T2L2 129 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 MBLAC2Q68D91 279 aa9.52□□□□□ -0.89
COL4A6-201ENST00000334504 TMEM41AQ96HV5 264 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms