RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ADRA1AP35348 466 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CTSKP43235 329 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RFX3P48380 749 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RGS19P49795 217 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 TGM3Q08188 693 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 HCAR2Q8TDS4 363 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 TFGQ92734 400 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 DHRS4Q9BTZ2 278 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 HDAC8Q9BY41 377 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 TOR3AQ9H497 397 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF221Q9UK13 617 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 HEBP2Q9Y5Z4 205 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 GMEB1Q9Y692 573 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CFAP20Q9Y6A4 193 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ANKDD1BA6NHY2 528 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 DIRAS1O95057 198 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 IFNA14P01570 189 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CD36P16671 472 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 JUNDP17535 347 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 FUT4P22083 530 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 RABIFP47224 123 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 TPMTP51580 245 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 KCTD11Q693B1 232 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NEK5Q6P3R8 708 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 C17orf64Q86WR6 236 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SORT1Q99523 831 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ATP6V1HQ9UI12 483 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 OR51B4Q9Y5P0 310 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 XPNPEP2O43895 674 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 STK16O75716 305 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 MYCLP1P12525 358 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 MYL12AP19105 171 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CR2P20023 1033 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ITPKAP23677 461 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NUDT1P36639 197 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CDC42P60953 191 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 HERVK_113P63132 956 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 HMGCS1Q01581 520 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ZSWIM7Q19AV6 140 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 PYDC2Q56P42 97 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 LYSMD4Q5XG99 296 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 USP30Q70CQ3 517 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 GKN2Q86XP6 184 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ZDHHC21Q8IVQ6 265 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SLC34A3Q8N130 599 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SCAIQ8N9R8 606 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 KCNJ9Q92806 393 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 TSACCQ96A04 125 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 BIRC7Q96CA5 298 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ERVK-6Q9BXR3 956 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 MKRN2Q9H000 416 aaKnown RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SPRTNQ9H040 489 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CAPN10Q9HC96 672 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ERGIC3Q9Y282 383 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 WDR37Q9Y2I8 494 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SIP14410 1827 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 MYOFQ9NZM1 2061 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 ZCWPW2A0A1B0GU75 182 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CPED1A4D0V7 1026 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 EFCAB9A8MZ26 197 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 S1PR4O95977 384 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 PRSS56P0CW18 603 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NDUFV2P19404 249 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 VBP1P61758 197 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SPIBQ01892 262 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NPTX1Q15818 432 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 C11orf91Q3C1V1 193 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 RBM12BQ8IXT5 1001 aaKnown RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 KRT78Q8N1N4 520 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 TCAIMQ8N3R3 496 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NLNQ9BYT8 704 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CRNNQ9UBG3 495 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-201ENST00000334136 NDOR1Q9UHB4 597 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 SPACA6W5XKT8 324 aa11.41□□□□□ -0.58
HDAC6-201ENST00000334136 CXCR6O00574 342 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 SERPINA1P01009 418 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 EIF2S1P05198 315 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 GNAO1P09471 354 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 SLC35E2BP0CK96 405 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 UROSP10746 265 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 NDUFS1P28331 727 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PREPP48147 710 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 LEPRP48357 1165 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 ELOCQ15369 112 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 XKR6Q5GH73 641 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 TMEM215Q68D42 235 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 Q6ZSR6 202 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 CEP97Q8IW35 865 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 UBE2E3Q969T4 207 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 REPS1Q96D71 796 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 ALG14Q96F25 216 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms