RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CLHC1Q8NHS4 586 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ISG20Q96AZ6 181 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 COQ8BQ96D53 544 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 NXPE2Q96DL1 559 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ERVK-6Q9BXR3 956 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 C11orf54Q9H0W9 315 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RHBGQ9H310 441 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 LTB4R2Q9NPC1 389 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ACOT13Q9NPJ3 140 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 EQTNQ9NQ60 294 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SLC22A11Q9NSA0 550 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SPHK1Q9NYA1 384 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MAB21L2Q9Y586 359 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 NME7Q9Y5B8 376 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SCN1AP35498 2009 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 A0A096LPK6 155 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SMIM35A0A1B0GVV1 85 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ARPC2O15144 300 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FABP7O15540 132 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 VEGFDO43915 354 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MFSD11O43934 449 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SELENOFO60613 162 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ARIH2O95376 493 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CALCAP01258 141 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MT-ND2P03891 347 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HDCP19113 662 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HTR1EP28566 365 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SOX6P35712 828 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PIGAP37287 484 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 KIR2DL3P43628 341 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TAS2R60P59551 318 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HOXC5Q00444 222 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 DEFA6Q01524 100 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SMAD4Q13485 552 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 LARS2Q15031 903 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 KANK2Q63ZY3 851 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PLET1Q6UQ28 207 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PROSER1Q86XN7 944 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 STPG2Q8N412 459 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF527Q8NB42 609 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SPPL2BQ8TCT7 592 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 UPF1Q92900 1129 aaKnown RBP eCLIP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FCRL3Q96P31 734 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MBOAT4Q96T53 435 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SLC30A3Q99726 388 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 P2RY13Q9BPV8 354 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TREX2Q9BQ50 279 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 DPH7Q9BTV6 452 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 UGT2B28Q9BY64 529 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PIGUQ9H490 435 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SYNDIG1Q9H7V2 258 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CHMP1AQ9HD42 196 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TPRKBQ9Y3C4 175 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 Q9Y3F1 56 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MTF2Q9Y483 593 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MCM3APO60318 1980 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 OR2A25A4D2G3 310 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 NME4O00746 187 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PRMT5O14744 637 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SCAMP1O15126 338 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 INPP4BO15327 924 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SLC31A2O15432 143 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 WDR47O94967 919 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ANGPTL1O95841 491 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MT-ND1P03886 318 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CHRNGP07510 517 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 HLA-EP13747 358 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 GADD45AP24522 165 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 TNFSF8P32971 234 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CTSKP43235 329 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ATXN1P54253 815 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PRMT2P55345 433 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SLC35A2P78381 396 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CAPRIN1Q14444 709 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 UGT3A2Q3SY77 523 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 C9orf57Q5W0N0 161 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 EEF1DP3Q658K8 133 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SLC27A1Q6PCB7 646 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CRTC1Q6UUV9 634 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MSANTD1Q6ZTZ1 278 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 EMC1Q8N766 993 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 DNAAF3Q8N9W5 541 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 OR8D4Q8NGM9 314 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 BPIFB1Q8TDL5 484 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ADAMTS14Q8WXS8 1223 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PYCR2Q96C36 320 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PKMYT1Q99640 499 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 WDR77Q9BQA1 342 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PDCD10Q9BUL8 212 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ITPAQ9BY32 194 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 AMBRA1Q9C0C7 1298 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ALX4Q9H161 411 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 DUSP21Q9H596 190 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MAGIXQ9H6Y5 334 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 FAM49BQ9NUQ9 324 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MED9Q9NWA0 146 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ASH2LQ9UBL3 628 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms