RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SCARB2Q14108 478 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 NEK5Q6P3R8 708 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 FAM170BA6NMN3 283 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 C2orf74A8MZ97 194 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 M0QX08 132 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 MYL12BO14950 172 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 C6orf47O95873 294 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 FEN1P39748 380 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 P2RY2P41231 377 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 PIK3CBP42338 1070 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 SEPHS1P49903 392 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 BROXQ5VW32 411 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 PEX5LQ8IYB4 626 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 TMEM27Q9HBJ8 222 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 DNAJB9Q9UBS3 223 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 H7C0S8 307 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 KIF1CO43896 1103 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 BCAS2O75934 225 aaPredicted RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 OPN1SWP03999 348 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 C8orf89P0DMQ9 161 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 HRH2P25021 359 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 MRPS21P82921 87 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 NR1D2Q14995 579 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 DCST1Q5T197 706 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 VN1R5Q7Z5H4 357 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 DPP10Q8N608 796 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 OR52A4PA6NMU1 304 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 E7EQ34 232 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 RTCAO00442 366 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 CD9P21926 228 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 CDK6Q00534 326 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX54-202ENST00000314045 BLOC1S3Q6QNY0 202 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 CLEC14AQ86T13 490 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 SLC38A4Q969I6 547 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 PDLIM5Q96HC4 596 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 Q96MT0 163 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 TRIM8Q9BZR9 551 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 ZNF860A6NHJ4 632 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 DFNA5O60443 496 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 SCN2BO60939 215 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 ARNTP27540 789 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 PDHA2P29803 388 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CTSKP43235 329 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 NR1H2P55055 460 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 NEUROD4Q9HD90 331 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CTPS2Q9NRF8 586 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 GSTM5P46439 218 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 RABIFP47224 123 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CCT3P49368 545 aaKnown RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 CEACAM20Q6UY09 585 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 Q8N9G6 341 aaPredicted RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 MZB1Q8WU39 189 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 PIGKQ92643 395 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 BTBD9Q96Q07 612 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 RASSF1Q9NS23 344 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 GPR34Q9UPC5 381 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 KNTC1P50748 2209 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 HMX2A2RU54 273 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 B4GALT2O60909 372 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 SLC25A12O75746 678 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CD247P20963 164 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CTHP32929 405 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 MMP12P39900 470 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 AQP4P55087 323 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 CGB2Q6NT52 195 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 ASB11Q8WXH4 323 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 HLA-CQ95604 372 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 TBC1D23Q9NUY8 699 aa13.19□□□□□ -0.3
DDX54-202ENST00000314045 NKX1-2Q9UD57 310 aaPredicted RBP13.19□□□□□ -0.3
DDX54-202ENST00000314045 LAMTOR5O43504 91 aa13.18□□□□□ -0.3
DDX54-202ENST00000314045 PPP1R8Q12972 351 aaKnown RBP13.18□□□□□ -0.3
DDX54-202ENST00000314045 Q6ZNB5 142 aa13.18□□□□□ -0.3
DDX54-202ENST00000314045 Q6ZSR6 202 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms