RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 COMMD6Q7Z4G1 85 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 MMP21Q8N119 569 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TTC29Q8NA56 475 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 HDAC2Q92769 488 aaKnown RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ARRDC3Q96B67 414 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 THUMPD1Q9NXG2 353 aaKnown RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 GALNT8Q9NY28 637 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 H0YIV9 168 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 J3QRK9 145 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RTCAO00442 366 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 BCL10O95999 233 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 TIA1P31483 386 aaKnown RBP eCLIP11.11□□□□□ -0.635e-6■□□□□ 8.4
PTPN2-201ENST00000309660 CHI3L1P36222 383 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 MAP2K4P45985 399 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 TAS2R50P59544 299 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ISL1P61371 349 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 HBA1P69905 142 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 HIST2H2ACQ16777 129 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF385BQ569K4 471 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 COX20Q5RI15 118 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RBM48Q5RL73 367 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 Q6ZPB1 254 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ADAMTS16Q8TE57 1224 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OR8D1Q8WZ84 308 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RAD9AQ99638 391 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 YTHDF1Q9BYJ9 559 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 NPPBP16860 134 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 GPX2P18283 190 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PRPH2P23942 346 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 DCKP27707 260 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PSMB9P28065 219 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ASMTP46597 345 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 DGKEP52429 567 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 XAF1Q6GPH4 301 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ARMCX6Q7L4S7 300 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ADCK2Q7Z695 626 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OR8J2Q8NGG1 315 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PPCDCQ96CD2 204 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RDH12Q96NR8 316 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ZCCHC2Q9C0B9 1178 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 MIEF1Q9NQG6 463 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PAK1IP1Q9NWT1 392 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SH3GLB1Q9Y371 365 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 A0A0G2JN53 185 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 TOR1BO14657 336 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 UGDHO60701 494 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 FGF19O95750 216 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 FADS2O95864 444 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 STATHP02808 62 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 PCCBP05166 539 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 EPHX1P07099 455 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 HTR1AP08908 422 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 POU2F1P14859 743 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF8P17098 575 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 IDSP22304 550 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 RRM2P31350 389 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 EPHA5P54756 1037 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 HTRA4P83105 476 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 CDK5R2Q13319 367 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SHQ1Q6PI26 577 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 CELF5Q8N6W0 485 aaKnown RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF540Q8NDQ6 660 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OR5AR1Q8NGP9 310 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OR13F1Q8NGS4 319 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OR56A3Q8NH54 315 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 MAGEB10Q96LZ2 347 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SLC35A5Q9BS91 424 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 OSGEPL1Q9H4B0 414 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ARMC7Q9H6L4 198 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
PTPN2-201ENST00000309660 ADPRHL2Q9NX46 363 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 MOSPD1Q9UJG1 213 aa11.11□□□□□ -0.63
PTPN2-201ENST00000309660 TRIM64A6NGJ6 449 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 NPC1O15118 1278 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PCDH8O95206 1070 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 CAMK2GQ13555 558 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 MYBPC3Q14896 1274 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 RGNQ15493 299 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 SPIN4Q56A73 249 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 KLHL35Q6PF15 583 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 GPR65Q8IYL9 337 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms