RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ECT2LQ008S8 904 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 IL18Q14116 193 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 MBTPS1Q14703 1052 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 CTC1Q2NKJ3 1217 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 FITM2Q8N6M3 262 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 OR2W6PQ8NHA6 318 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 RAB40AQ8WXH6 277 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ZNF597Q96LX8 424 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 HEPHQ9BQS7 1158 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 FEM1AQ9BSK4 669 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 CNPPD1Q9BV87 410 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 DEC1Q9P2X7 70 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ZNF391Q9UJN7 358 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 OLFM2O95897 454 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 MPC1LP0DKB6 136 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PTPRAP18433 802 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 UQCRC2P22695 453 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 EFEMP1Q12805 493 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PDGFRLQ15198 375 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PIGZQ86VD9 579 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ASB17Q8WXJ9 295 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TRMT2BQ96GJ1 504 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 ZDHHC12Q96GR4 267 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 DPAGT1Q9H3H5 408 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TNFRSF11BO00300 401 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ADAM23O75077 832 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TGM4P49221 684 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 DCAF7P61962 342 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 KLF10Q13118 480 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 UPRTQ96BW1 309 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ARMC5Q96C12 935 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 FCRL2Q96LA5 508 aaPredicted RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 TCF7L1Q9HCS4 588 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PTPRHQ9HD43 1115 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 SDHAF2Q9NX18 166 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TMEM260Q9NX78 707 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 MED31Q9Y3C7 131 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 SPAG17Q6Q759 2223 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PDE4DIPQ5VU43 2346 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 OR51F1A6NGY5 319 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 CCNB2O95067 398 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ANXA2P07355 339 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 CLCN7P51798 805 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 XKP51811 444 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 RGS8P57771 180 aaPredicted RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 HSD11B2P80365 405 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 BDH1Q02338 343 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TAF13Q15543 124 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 GPR139Q6DWJ6 353 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 HS3ST5Q8IZT8 346 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 IP6K3Q96PC2 410 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 WDR6Q9NNW5 1121 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 TMEM39AQ9NV64 488 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TRPC4Q9UBN4 977 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ETV7Q9Y603 341 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PRSS44E7EML9 344 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 GTPBP1O00178 669 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 H1F0P07305 194 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 CTSEP14091 401 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 RPS5P46782 204 aaKnown RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 RAG2P55895 527 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 TAS2R50P59544 299 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 MOGSQ13724 837 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 LINGO4Q6UY18 593 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 NUP54Q7Z3B4 507 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 PDSS2Q86YH6 399 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 ZNF567Q8N184 647 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 FAM129BQ96TA1 746 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 FAM83DQ9H4H8 585 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 NFKBIL1Q9UBC1 381 aaPredicted RBP3.9□□□□□ -1.78
USH2A-201ENST00000307340 ASF1AQ9Y294 204 aa3.9□□□□□ -1.78
USH2A-201ENST00000307340 APODP05090 189 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 S100PP25815 95 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 INHBCP55103 352 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 RPS15AP62244 130 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 DAG1Q14118 895 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GRM2Q14416 872 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 DNAJC14Q6Y2X3 702 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 USP49Q70CQ1 688 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ANKLE1Q8NAG6 615 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 RIPOR3Q96MK2 946 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GPR83Q9NYM4 423 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 RNF181Q9P0P0 153 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TNFRSF10DQ9UBN6 386 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SUSD2Q9UGT4 822 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PTGES3LE9PB15 166 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 WNT9AO14904 365 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TYROBPO43914 113 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 HDCP19113 662 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GNMTQ14749 295 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ERMP1Q7Z2K6 904 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 NOXA1Q86UR1 476 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TCEAL3Q969E4 200 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 MUL1Q969V5 352 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ACOX2Q99424 681 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 Q9N2J8 555 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SDR39U1Q9NRG7 319 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 KIF25Q9UIL4 384 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SLC35A3Q9Y2D2 325 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms