RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 EPB41L4BQ9H329 900 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SERINC1Q9NRX5 453 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TM7SF3Q9NS93 570 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 INTS6Q9UL03 887 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SH3GLB1Q9Y371 365 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 KIAA1217Q5T5P2 1943 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SHISA7A6NL88 538 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PRLP01236 227 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 POU2F2P09086 479 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 IL1RNP18510 177 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PRLHRP49683 370 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 CCR5P51681 352 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 STEAP4Q687X5 459 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ADAMTSL4Q6UY14 1074 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 RTL4Q6ZR62 310 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 CYS1Q717R9 158 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TICAM1Q8IUC6 712 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 DDHD1Q8NEL9 900 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 GPR150Q8NGU9 434 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TEFMQ96QE5 360 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 LPAR4Q99677 370 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PELOQ9BRX2 385 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 MAGEL2Q9UJ55 1249 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PACSIN3Q9UKS6 424 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SAMD4AQ9UPU9 718 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 NFS1Q9Y697 457 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SLC9B1P1A6NJY1 282 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TP53I11O14683 189 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 CREB1P16220 341 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ALOX12P18054 663 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 MAGP20916 626 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 FOLR3P41439 243 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 C1DQ13901 141 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 DOC2AQ14183 400 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ZFP1Q6P2D0 407 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ARMC8Q8IUR7 673 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 RELL1Q8IUW5 271 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 KIAA1958Q8N8K9 716 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 BHLHE22Q8NFJ8 381 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 OLFM1Q99784 485 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 THUMPD1Q9NXG2 353 aaKnown RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PDE10AQ9Y233 779 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ZCWPW2A0A1B0GU75 182 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 SCDO00767 359 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF763Q0D2J5 394 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF678Q5SXM1 525 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TTC33Q6PID6 262 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-202ENST00000306042 CCDC81Q6ZN84 652 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 BIRC7Q96CA5 298 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PKMYT1Q99640 499 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 PRODH2Q9UF12 536 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 MAU2Q9Y6X3 613 aa8.93□□□□□ -0.98
PTPRE-202ENST00000306042 TCRBV5S1A1TA0A578 114 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 IGLV3-25P01717 112 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 CD247P20963 164 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 UGT2B15P54855 530 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ITGA1P56199 1179 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 IL5RAQ01344 420 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SNTA1Q13424 505 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 NSDHLQ15738 373 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM35AQ53FP2 167 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 CEP97Q8IW35 865 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 OFCC1Q8IZS5 231 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 OR6Y1Q8NGX8 325 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 FATE1Q969F0 183 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF382Q96SR6 550 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 RIBC2Q9H4K1 309 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 NEUROD4Q9HD90 331 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 STOX2Q9P2F5 926 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 DICER1Q9UPY3 1922 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ATXN1LP0C7T5 689 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SAGP10523 405 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SIM1P81133 766 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 DCAF12Q5T6F0 453 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ADGRG6Q86SQ4 1221 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 HORMAD2Q8N7B1 307 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 F2RL3Q96RI0 385 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SMAD5Q99717 465 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 CRB3Q9BUF7 120 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 MCCC2Q9HCC0 563 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 GPRC5BQ9NZH0 403 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 DLEC1Q9Y238 1755 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ELOVL7A1L3X0 281 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 FAM234BA2RU67 622 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 XKP51811 444 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 KCNJ2P63252 427 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PTSQ03393 145 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SLAMF1Q13291 335 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 RPE65Q16518 533 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PDSS1Q5T2R2 415 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms