RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CHIT1Q13231 466 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 MAB21L1Q13394 359 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 RNF219Q5W0B1 726 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SUSD1Q6UWL2 747 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 PAMR1Q6UXH9 720 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 LAPTM4BQ86VI4 370 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 DNAJC22Q8N4W6 341 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ASB15Q8WXK1 588 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 CORO2BQ9UQ03 480 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 DLGAP4Q9Y2H0 992 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 MAP4K5Q9Y4K4 846 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ANKRD66B4E2M5 251 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SOX3P41225 446 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 CLDN8P56748 225 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF267Q14586 743 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 CERS6Q6ZMG9 384 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SPRTNQ9H040 489 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 RNF121Q9H920 327 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 TEX28O15482 410 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 B3GALT4O96024 378 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRR35P0CG20 571 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PPIBP23284 216 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 RPS24P62847 133 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 VWA5B2Q8N398 1253 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 AQP11Q8NBQ7 271 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SETD6Q8TBK2 473 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 RNFT2Q96EX2 444 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 OR5M11Q96RB7 305 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 MED28Q9H204 178 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 NLKQ9UBE8 527 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ATP6V1HQ9UI12 483 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 NDRG4Q9ULP0 352 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 RGS13O14921 159 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 MPZL2O60487 215 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 RPLP2P05387 115 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 GGT2P36268 569 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 CDKN2CP42773 168 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SYTL3Q4VX76 610 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 TAPT1Q6NXT6 567 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 LAX1Q8IWV1 398 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PGBD5Q8N414 524 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 KLHL6Q8WZ60 621 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 CPPED1Q9BRF8 314 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ACAT2Q9BWD1 397 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 CLMPQ9H6B4 373 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 OR7A17O14581 309 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ANXA4P09525 319 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PCBP2Q15366 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 FAM209AQ5JX71 171 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 LRRC66Q68CR7 880 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 FAM109AQ8N4B1 249 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ZSCAN5AQ9BUG6 496 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 A3GALT2U3KPV4 340 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRAMEF33A0A0G2JMD5 474 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRR23D1E9PI22 279 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRAMEF10O60809 474 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ALPIP09923 528 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 PRR23D2P0DMB1 279 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 DDOSTP39656 456 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ALDH6A1Q02252 535 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SEMG2Q02383 582 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 CDH18Q13634 790 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 TEAD4Q15561 434 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 FAM171A1Q5VUB5 890 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 DEF8Q6ZN54 512 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 LRRTM3Q86VH5 581 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 YIPF7Q8N8F6 280 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 HJURPQ8NCD3 748 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 TVP23BQ9NYZ1 205 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 SLC9A8Q9Y2E8 581 aa12.61□□□□□ -0.39
TRIM35-201ENST00000305364 MRPS7Q9Y2R9 242 aaKnown RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 ZFP37Q9Y6Q3 630 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-201ENST00000305364 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 A0A1W2PQL4 384 aaPredicted RBP12.6□□□□□ -0.39
TRIM35-201ENST00000305364 GFRA2O00451 464 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 MAP2K3P46734 347 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 OR3A3P47888 321 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms