RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAM72DQ6L9T8 149 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 TUBA1AQ71U36 451 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 FAM72BQ86X60 149 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 PPP1R14BQ96C90 147 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 WNT6Q9Y6F9 365 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 CDRT1O95170 752 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 CSN2P05814 226 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 C8orf89P0DMQ9 161 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ST3GAL3Q11203 375 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 HMGB4Q8WW32 186 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TRIM36Q9NQ86 728 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 MED11Q9P086 117 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 RHCGQ9UBD6 479 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 PTBP2Q9UKA9 531 aaKnown RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 F2P00734 622 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 HSDL2Q6YN16 418 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 SYVN1Q86TM6 617 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 OR52E4Q8NGH9 312 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 SUN5Q8TC36 379 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 EHD1Q9H4M9 534 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 OR1I1O60431 355 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 HK1P19367 917 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 OR3A3P47888 321 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 OR3A2P47893 321 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 PREPP48147 710 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 NRG3P56975 720 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TLE2Q04725 743 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF548Q8NEK5 533 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ADAD1Q96M93 576 aaKnown RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 RNF6Q9Y252 685 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TMEM98Q9Y2Y6 226 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 OR6C70A6NIJ9 312 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 PCDHGA12O60330 932 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TYRP14679 529 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 SUSD1Q6UWL2 747 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 NDC1Q9BTX1 674 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 XYLT2Q9H1B5 865 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ADAM7Q9H2U9 754 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 J3QLW9 94 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF19P17023 458 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 GDI1P31150 447 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 GKP32189 559 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 RPS3AP61247 264 aaKnown RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 CEP76Q8TAP6 659 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 C5orf51A6NDU8 294 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 XPNPEP2O43895 674 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-201ENST00000303531 CDH11P55287 796 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 RAB8AP61006 207 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 PHC1P78364 1004 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 CD83Q01151 205 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 SLC45A1Q9Y2W3 748 aa13.51□□□□□ -0.25
PRKCB-201ENST00000303531 CD72P21854 359 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 FSHRP23945 695 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ARSFP54793 590 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 NANOGP8Q6NSW7 305 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-201ENST00000303531 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
PRKCB-201ENST00000303531 NANOGQ9H9S0 305 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 CENPMQ9NSP4 180 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 C14orf105Q9NVL8 296 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 MRPS17Q9Y2R5 130 aaKnown RBP13.5□□□□□ -0.25
PRKCB-201ENST00000303531 PRMT3O60678 531 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 PRH1P02810 166 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 MAPK14Q16539 360 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 TUBA3EQ6PEY2 450 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 XKR5Q6UX68 686 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF208O43345 1280 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ATP6V1G1O75348 118 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 IFI30P13284 250 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 MATN1P21941 496 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 OR56A1Q8NGH5 318 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 RIT1Q92963 219 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 DNAJC27Q9NZQ0 273 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 KCNK6Q9Y257 313 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 MYH2Q9UKX2 1941 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 FZD9O00144 591 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 CHP2O43745 196 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 PGAM2P15259 253 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 BMP8BP34820 402 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 C6orf136Q5SQH8 315 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 TMEM80Q96HE8 168 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 HIST1H2AAQ96QV6 131 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 CCND3P30281 292 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-201ENST00000303531 NFATC2Q13469 925 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF517Q6ZMY9 492 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms